CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07008	Canola	cytosol	96.86	96.86
CDY24963	Canola	cytosol	90.25	90.25
AT2G39420.1	Thale cress	cytosol	87.74	88.01
CDY07651	Canola	cytosol	89.94	79.22
CDY72172	Canola	cytosol	38.68	78.34
CDY07007	Canola	cytosol	53.14	74.45
CDY07006	Canola	cytosol	69.81	71.38
CDX73397	Canola	cytosol	67.92	71.05
CDY40205	Canola	cytosol	67.92	71.05
KRG92965	Soybean	cytosol	66.35	64.53
PGSC0003DMT400077598	Potato	cytosol	63.84	63.64
Solyc04g010250.2.1	Tomato	cytosol	63.21	63.01
VIT_00s0317g00110.t01	Wine grape	cytosol	61.32	61.13
KRH36216	Soybean	nucleus	66.04	60.52
Os01t0837200-01	Rice	cytosol	21.7	57.98
EES03847	Sorghum	cytosol	55.97	57.61
HORVU3Hr1G087040.1	Barley	cytosol	28.3	57.32
Zm00001d012434_P001	Maize	cytosol	17.61	56.57
Zm00001d042944_P001	Maize	cytosol	54.4	55.99
TraesCS3A01G355000.1	Wheat	cytosol	49.06	55.12
TraesCS3D01G349000.1	Wheat	cytosol	54.72	54.55
TraesCS3A01G355100.1	Wheat	cytosol	49.69	52.84
TraesCS3B01G388000.1	Wheat	cytosol	49.69	52.84
TraesCS3D01G349100.1	Wheat	cytosol	49.37	52.51
CDX76116	Canola	cytosol	55.35	50.87
OQU87824	Sorghum	cytosol	47.8	50.5
GSMUA_Achr6P34380_001	Banana	cytosol	54.09	49.86
CDX76667	Canola	cytosol	52.2	49.11
CDX83323	Canola	cytosol	52.83	48.41
CDX95729	Canola	cytosol	52.83	48.41
CDY27476	Canola	cytosol	52.52	48.13
CDY55538	Canola	cytosol	52.52	47.99
CDY02917	Canola	cytosol, endoplasmic reticulum, vacuole	55.35	47.83
CDX93957	Canola	cytosol	44.03	46.51
HORVU3Hr1G086980.2	Barley	extracellular	24.21	45.83
CDX89152	Canola	mitochondrion	52.83	45.28
CDX79202	Canola	cytosol	24.84	44.13
HORVU3Hr1G087020.4	Barley	mitochondrion	50.0	43.92
CDY20587	Canola	cytosol	42.77	42.37
CDY20979	Canola	cytosol	42.45	41.93
CDX93265	Canola	cytosol	73.9	38.97
CDY11452	Canola	cytosol	46.23	38.68
CDX69469	Canola	mitochondrion	41.82	36.84
CDX68059	Canola	cytosol	21.07	35.26
CDY26499	Canola	mitochondrion	40.25	34.22
CDX85571	Canola	plastid	34.91	33.84
CDY69863	Canola	cytosol	35.22	33.43
CDY44908	Canola	cytosol	34.91	33.13
CDY40888	Canola	plastid	39.62	32.98
CDY40890	Canola	plastid	39.62	32.9
CDY38348	Canola	plastid	39.62	32.9
CDY13986	Canola	cytosol	33.96	32.24
CDY62199	Canola	cytosol	32.7	31.71
CDY72184	Canola	cytosol	32.7	31.71
CDX92543	Canola	cytosol	33.65	31.56
CDY62163	Canola	plastid	20.75	30.28
CDX69743	Canola	cytosol, endoplasmic reticulum, golgi, plastid	32.08	26.15
CDX97130	Canola	cytosol, endoplasmic reticulum, golgi, plastid	31.76	25.9
CDX83852	Canola	plastid	29.25	24.54
CDX96478	Canola	plastid	27.67	24.31
CDX96722	Canola	plastid	29.25	23.97
CDX72991	Canola	plastid	29.56	23.1
CDY38132	Canola	mitochondrion	42.77	22.48
CDX85514	Canola	cytosol	43.4	22.4
CDX68225	Canola	mitochondrion	31.13	21.29
CDY11104	Canola	plastid	30.82	21.21

Protein Annotations

EnsemblPlants:CDX93264	EnsemblPlantsGene:GSBRNA2T00155222001	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:Hydrolase_4
InterPro:IPR029058	PANTHER:PTHR11614	PANTHER:PTHR11614:SF92	PFAM:PF12146	PRINTS:PR00111	ProteinID:CDX93264
ProteinID:CDX93264.1	SUPFAM:SSF53474	UniParc:UPI0004EED1D4	MapMan:5.7.1.1	:	:

Description

BnaC04g46320D

Coordinates

chrLK031875:-:635912..638599

Molecular Weight (calculated)

35978.2 Da

IEP (calculated)

6.411

GRAVY (calculated)

-0.431

Length

318 amino acids

Sequence
(BLAST)

001: MQASETENIK YEESFIKNSR GTKLFTCKWL PANKEPKALI FICHGYAMEC SITMNSTARR LVKAGYGVYG MDYEGHGKSD GLSAYVPNFD HLVDDVSAHY
101: TSICEREENK EKMRYLLGES MGGAVLLLLH RKKPEFWDGA VLVAPMCKIA EEMKPNPVVI SVLSKLSGVI PTWKIIPGQD IIETAFKQPE VRKQVRENPY
201: CYKGRPRLKT ANELLRISTD LEKRLDEVSL PFMVLHGEDD KVTDKAVSGQ LYEVASSSDK TFKLYPGMWH GLLYGETPEN IEIVFADIIG WLDKRASDRN
301: GGFESELNRK EDGFTSKE

Best Arabidopsis Sequence Match ( AT2G39420.1 )
(BLAST)

001: MASETENIKY EESFIKNTRG MKLFTCKWVP AKQEPKALVF ICHGYAMECS ITMNSTARRL VKAGFAVYGI DYEGHGKSDG LSAYVPNFDH LVDDVSTHYT
101: SICEKEENKG KMRFLLGESM GGAVLLLLHR KKPQFWDGAV LVAPMCKIAE EMKPSPLVIS ILAKLSGVIP SWKIIPGQDI IETAFKQPEI RKQVRENPYC
201: YKGRPRLKTA YELLRVSTDL EKRLNEVSLP FIVLHGEDDK VTDKAVSRQL YEVASSSDKT FKLYPGMWHG LLYGETPENI ETVFADIIGW LDKKVADESG
301: GFESELKRKN DGIPLKG

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8RXN7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.