CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY44908	Canola	cytosol	98.51	98.51
Bra020032.1-P	Field mustard	cytosol	97.91	97.91
CDY13986	Canola	cytosol	90.15	90.15
AT5G19290.1	Thale cress	cytoskeleton, cytosol, plastid	88.66	90.0
CDX92543	Canola	cytosol	91.04	89.97
KRH34878	Soybean	cytosol	71.94	74.15
CDX85571	Canola	plastid	70.75	72.26
VIT_13s0019g04260.t01	Wine grape	cytosol	68.66	69.91
GSMUA_Achr1P08950_001	Banana	peroxisome	68.06	68.88
Solyc05g056000.2.1	Tomato	cytosol	68.06	68.06
PGSC0003DMT400060321	Potato	cytosol	67.16	67.16
Zm00001d040681_P001	Maize	cytosol, mitochondrion	62.69	64.02
TraesCS4B01G051000.1	Wheat	cytosol	61.79	63.5
Os01t0317800-01	Rice	plasma membrane	62.09	63.22
TraesCS4D01G051100.1	Wheat	cytosol, golgi	61.19	63.08
TraesCS4A01G263500.1	Wheat	cytosol	61.19	63.08
EES00674	Sorghum	cytosol	61.19	62.12
CDY20587	Canola	cytosol	39.1	40.81
CDY20979	Canola	cytosol	37.91	39.44
CDY24963	Canola	cytosol	34.33	36.16
CDY07007	Canola	cytosol	23.88	35.24
CDX93264	Canola	cytosol	33.43	35.22
CDY07008	Canola	cytosol	32.54	34.28
CDY40205	Canola	cytosol	31.04	34.21
CDX73397	Canola	cytosol	31.04	34.21
CDY72172	Canola	cytosol	15.82	33.76
CDY07006	Canola	cytosol	30.75	33.12
CDY07651	Canola	cytosol	34.63	32.13
CDX79202	Canola	cytosol	17.01	31.84
CDX76667	Canola	cytosol	31.94	31.66
CDX95729	Canola	cytosol	31.04	29.97
CDX83323	Canola	cytosol	31.04	29.97
CDX93957	Canola	cytosol	26.87	29.9
CDY27476	Canola	cytosol	30.75	29.68
CDY62163	Canola	plastid	19.1	29.36
CDY55538	Canola	cytosol	30.45	29.31
CDY62199	Canola	cytosol	28.06	28.66
CDY72184	Canola	cytosol	28.06	28.66
CDX76116	Canola	cytosol	29.55	28.61
CDX89152	Canola	mitochondrion	31.34	28.3
CDY02917	Canola	cytosol, endoplasmic reticulum, vacuole	29.85	27.17
CDY38348	Canola	plastid	30.45	26.63
CDY40888	Canola	plastid	30.15	26.44
CDY40890	Canola	plastid	30.15	26.37
CDX68059	Canola	cytosol	14.63	25.79
CDX69469	Canola	mitochondrion	26.87	24.93
CDY26499	Canola	mitochondrion	26.87	24.06
CDX83852	Canola	plastid	26.87	23.75
CDX96478	Canola	plastid	25.07	23.2
CDX96722	Canola	plastid	26.57	22.94
CDY11452	Canola	cytosol	25.97	22.89
CDX72991	Canola	plastid	27.16	22.36
CDX69743	Canola	cytosol, endoplasmic reticulum, golgi, plastid	24.48	21.03
CDX97130	Canola	cytosol, endoplasmic reticulum, golgi, plastid	24.48	21.03
CDY11104	Canola	plastid	26.87	19.48
CDX68225	Canola	mitochondrion	26.87	19.35
CDX93265	Canola	cytosol	32.84	18.24
CDY38132	Canola	mitochondrion	28.36	15.7
CDX85514	Canola	cytosol	28.06	15.26

Protein Annotations

EnsemblPlants:CDY69863	EnsemblPlantsGene:GSBRNA2T00093091001	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:Hydrolase_4	InterPro:IPR029058
PANTHER:PTHR11614	PANTHER:PTHR11614:SF101	PFAM:PF12146	ProteinID:CDY69863	ProteinID:CDY69863.1	SEG:seg
SUPFAM:SSF53474	UniParc:UPI0004EBEF5C	UniProt:A0A078JQL0	MapMan:35.1	:	:

Description

BnaCnng65700DBnaCnng65700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JQL0]

Coordinates

chrLK040536:-:1000..2220

Molecular Weight (calculated)

37175.4 Da

IEP (calculated)

6.130

GRAVY (calculated)

-0.116

Length

335 amino acids

Sequence
(BLAST)

001: MGLHPIADAD ERNPFGSLSA DEFYAKHSVS HSSAFITNPR GLKLFTQWWS PLPPTPPVGI VAVVHGFTGE SSWFLQLTSI LFAKSGFITC AIDHQGHGFS
101: DGLVAHIPDI NPVVDDCISF FDDFRSRQET PDLPCFLYSE SLGGAIALYV SLRQRGAWDG LVLNGAMCGI SRKFKPPWPL EHLLFVVANL IPTWRVIPTR
201: GSIPDVSFKE PWKRKLALAS PRRTVARPRA ATAYELIRIC NELQEKFEEV DVPLLIVHGG GDVVCDPACV EELHRRAASE DKTIKIYPEM WHQMVGESEE
301: NVDLVYGDIL NWLKSRAESA AERKREGRAA VDGGA

Best Arabidopsis Sequence Match ( AT5G19290.1 )
(BLAST)

001: MGLHPISDAN EHNPFGSLTA DEFYAKHSVS HSSAFITNPR GLKLFTQWWS PLPPTKPIGI IAVVHGFTGE SSWFLQLTSI LFAKSGFITC AIDHQGHGFS
101: DGLIAHIPDI NPVVDDCISF FDDFRSRQTP SDLPCFLYSE SLGGAIALYI SLRQRGVWDG LILNGAMCGI SDKFKPPWPL EHLLFVVANL IPTWRVIPTR
201: GSIPDVSFKE PWKRKLAMAS PRRTVAKPRA ATAYELIRVC KDLQGRFEEV EVPLLIVHGG GDVVCDVACV EELHRRAISE DKTIKIYPEL WHQMIGESEE
301: KVDLVYGDML SWLKSRAERK ARAAVDGGAA

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8VZV6]
SUBAcon: [plastid,cytoskeleton,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.