Factsheet for PGSC0003DMT400060321

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g056000.2.1	Tomato	cytosol	95.52	95.52
VIT_13s0019g04260.t01	Wine grape	cytosol	71.64	72.95
KRH34878	Soybean	cytosol	68.36	70.46
AT5G19290.1	Thale cress	cytoskeleton, cytosol, plastid	66.87	67.88
Bra002224.1-P	Field mustard	cytosol	67.46	67.46
CDY13986	Canola	cytosol	67.16	67.16
CDY44908	Canola	cytosol	67.16	67.16
CDY69863	Canola	cytosol	67.16	67.16
Bra020032.1-P	Field mustard	cytosol	67.16	67.16
GSMUA_Achr1P08950_001	Banana	peroxisome	65.37	66.16
CDX92543	Canola	cytosol	66.87	66.08
AT5G14980.1	Thale cress	plastid	64.48	66.06
CDX85571	Canola	plastid	64.18	65.55
TraesCS4B01G051000.1	Wheat	cytosol	60.6	62.27
TraesCS4A01G263500.1	Wheat	cytosol	59.4	61.23
TraesCS4D01G051100.1	Wheat	cytosol, golgi	59.1	60.92
Zm00001d040681_P001	Maize	cytosol, mitochondrion	59.4	60.67
Os01t0317800-01	Rice	plasma membrane	59.4	60.49
EES00674	Sorghum	cytosol	58.21	59.09
PGSC0003DMT400054412	Potato	cytosol	44.48	46.71
PGSC0003DMT400012910	Potato	cytosol	38.21	40.38
PGSC0003DMT400077598	Potato	cytosol	33.43	35.11
PGSC0003DMT400062139	Potato	cytosol	22.99	33.92
PGSC0003DMT400081375	Potato	cytosol	34.63	32.95
PGSC0003DMT400014303	Potato	cytosol	29.85	30.58
PGSC0003DMT400067900	Potato	cytosol	30.45	29.74
PGSC0003DMT400026999	Potato	cytosol	28.96	28.36
PGSC0003DMT400037702	Potato	cytosol	32.24	27.2
PGSC0003DMT400083974	Potato	plastid	26.27	21.57
PGSC0003DMT400011430	Potato	cytosol	23.28	19.31

Protein Annotations

EnsemblPlants:PGSC0003DMT400060321	EnsemblPlantsGene:PGSC0003DMG400023465	EntrezGene:102588882	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1
InterPro:Hydrolase_4	InterPro:IPR029058	PANTHER:PTHR11614	PANTHER:PTHR11614:SF101	PFAM:PF12146	PGSC:PGSC0003DMG400023465
PRINTS:PR00111	RefSeq:XP_006345805.1	SUPFAM:SSF53474	UniParc:UPI000295D890	UniProt:M1C5L9	MapMan:35.1

Description

Phospholipase [Source:PGSC_GENE;Acc:PGSC0003DMG400023465]

Coordinates

chr5:+:51516702..51518689

Molecular Weight (calculated)

37041.6 Da

IEP (calculated)

6.838

GRAVY (calculated)

-0.081

Length

335 amino acids

Sequence
(BLAST)

001: MKHPVAEANE LSPFGSLSQS EFYSHHSVTH NSEFITNSRG LKLFTQWWSP LPPAKIIGVV CVVHGFTGES SWFVQLTAVH IAKNGFIVCA IDHQGHGFSD
101: GLIAHIPDLN LVVDDCISFF DSFRDLHVPP SLPSFLYAES LGGAIALLIT LREGDSAQRR PFDGVVLNGG MYGISNKFKP PWPLEHLLGI AAVLIPTWPV
201: VPTRGSLPLV AFKEEWKKKL AIASPKRPLI KPRPATAREL MRVCRELQGR FEEVKVPFLI VHGSDDNICD PACAEELYRR STSKDKTLKI YPGMWHQLVG
301: EPEENVEKVF GDVVEWLKTR AEGATGDKTT VDGGA

Best Arabidopsis Sequence Match ( AT5G19290.1 )
(BLAST)

001: MGLHPISDAN EHNPFGSLTA DEFYAKHSVS HSSAFITNPR GLKLFTQWWS PLPPTKPIGI IAVVHGFTGE SSWFLQLTSI LFAKSGFITC AIDHQGHGFS
101: DGLIAHIPDI NPVVDDCISF FDDFRSRQTP SDLPCFLYSE SLGGAIALYI SLRQRGVWDG LILNGAMCGI SDKFKPPWPL EHLLFVVANL IPTWRVIPTR
201: GSIPDVSFKE PWKRKLAMAS PRRTVAKPRA ATAYELIRVC KDLQGRFEEV EVPLLIVHGG GDVVCDVACV EELHRRAISE DKTIKIYPEL WHQMIGESEE
301: KVDLVYGDML SWLKSRAERK ARAAVDGGAA

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8VZV6]
SUBAcon: [plastid,cytoskeleton,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.