Factsheet for TraesCS4D01G051100.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G051000.1	Wheat	cytosol	97.54	97.24
TraesCS4A01G263500.1	Wheat	cytosol	96.92	96.92
Os01t0317800-01	Rice	plasma membrane	87.08	86.02
Zm00001d040681_P001	Maize	cytosol, mitochondrion	84.92	84.15
EES00674	Sorghum	cytosol	81.85	80.61
GSMUA_Achr1P08950_001	Banana	peroxisome	72.0	70.69
KRH34878	Soybean	cytosol	66.15	66.15
VIT_13s0019g04260.t01	Wine grape	cytosol	65.23	64.44
Bra020032.1-P	Field mustard	cytosol	63.08	61.19
CDY44908	Canola	cytosol	63.08	61.19
CDY69863	Canola	cytosol	63.08	61.19
Bra002224.1-P	Field mustard	cytosol	62.15	60.3
CDY13986	Canola	cytosol	62.15	60.3
AT5G19290.1	Thale cress	cytoskeleton, cytosol, plastid	60.92	60.0
Solyc05g056000.2.1	Tomato	cytosol	61.85	60.0
CDX92543	Canola	cytosol	62.46	59.88
PGSC0003DMT400060321	Potato	cytosol	60.92	59.1
AT5G14980.1	Thale cress	plastid	58.46	58.1
CDX85571	Canola	plastid	57.85	57.32
TraesCS2D01G208700.1	Wheat	cytosol	40.62	40.0
TraesCS5D01G163000.1	Wheat	cytosol	33.54	36.45
TraesCS4D01G133100.1	Wheat	cytosol	33.85	35.14
TraesCS5D01G163100.1	Wheat	cytosol	33.85	32.84
TraesCS3D01G349100.1	Wheat	cytosol	29.54	32.11
TraesCS3D01G349000.1	Wheat	cytosol	30.46	31.03
TraesCS1D01G231500.1	Wheat	peroxisome	32.31	30.7
TraesCS2D01G374700.1	Wheat	cytosol	31.38	29.82
TraesCS5D01G299500.3	Wheat	plastid	29.23	25.47
TraesCS3D01G263200.2	Wheat	mitochondrion	28.31	24.47
TraesCS3D01G142300.1	Wheat	cytosol	24.31	20.31
TraesCS4D01G051900.2	Wheat	endoplasmic reticulum, golgi	23.08	19.58
TraesCS5D01G209300.2	Wheat	mitochondrion, plastid	22.77	18.88

Protein Annotations

EnsemblPlants:TraesCS4D01G051100.1	EnsemblPlantsGene:TraesCS4D01G051100	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:Hydrolase_4
InterPro:IPR029058	PANTHER:PTHR11614	PANTHER:PTHR11614:SF101	PFAM:PF12146	PRINTS:PR00111	SEG:seg
SUPFAM:SSF53474	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr4D:-:26933623..26934600

Molecular Weight (calculated)

35489.5 Da

IEP (calculated)

6.674

GRAVY (calculated)

-0.053

Length

325 amino acids

Sequence
(BLAST)

001: MVHPVAEADE RSPMGGLTAD EYYARHGVTH TSSTFVNPRG LRIFTQRWVP SGDAPVLGAI AVVHGFTGES SWMVLLTAVH FAKQGFAVAA VDHQGHGFSE
101: GLQAHIPDIT PVLDDCEAAF APFRADYPPP LPCFLYGESL GGAIALLLHL RDKPRWRDGA VLNGAMCGVS PRFMPPWPLE HLLWAAAAVA PTWHVAFTRG
201: NIPGRSFKVE WKRALALASP RRTTAPPRAA TALELLRVCR ELQARFEELE LPLLAVHGGD DTVCDPACVE EMHRRAGSKD KTLRVYPGMW HQIVGEPEEN
301: VEQVFADVLD WLKARAAGPH SALVG

Best Arabidopsis Sequence Match ( AT5G19290.1 )
(BLAST)

001: MGLHPISDAN EHNPFGSLTA DEFYAKHSVS HSSAFITNPR GLKLFTQWWS PLPPTKPIGI IAVVHGFTGE SSWFLQLTSI LFAKSGFITC AIDHQGHGFS
101: DGLIAHIPDI NPVVDDCISF FDDFRSRQTP SDLPCFLYSE SLGGAIALYI SLRQRGVWDG LILNGAMCGI SDKFKPPWPL EHLLFVVANL IPTWRVIPTR
201: GSIPDVSFKE PWKRKLAMAS PRRTVAKPRA ATAYELIRVC KDLQGRFEEV EVPLLIVHGG GDVVCDVACV EELHRRAISE DKTIKIYPEL WHQMIGESEE
301: KVDLVYGDML SWLKSRAERK ARAAVDGGAA

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8VZV6]
SUBAcon: [plastid,cytoskeleton,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.