Factsheet for TraesCS3D01G142300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
endoplasmic reticulum 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum, plastid
ChloroP:	plastid
MultiLoc:	endoplasmic reticulum
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G160100.1	Wheat	cytosol	99.23	99.23
TraesCS3A01G312100.1	Wheat	cytosol	96.66	96.66
HORVU3Hr1G027160.1	Barley	golgi, mitochondrion	97.43	92.89
TraesCS3B01G222200.1	Wheat	endoplasmic reticulum, plasma membrane	37.79	84.48
Os01t0199400-01	Rice	cytosol, endoplasmic reticulum, peroxisome	84.06	82.78
EES00118	Sorghum	cytosol, nucleus, plastid, vacuole	82.01	78.96
Zm00001d039416_P001	Maize	cytosol	80.21	78.0
GSMUA_Achr10P...	Banana	cytosol	57.33	74.58
GSMUA_Achr8P20130_001	Banana	plastid	64.52	67.29
GSMUA_Achr7P13720_001	Banana	plastid	68.64	67.09
KRH62086	Soybean	plastid	63.24	65.08
KRH52771	Soybean	cytosol, endoplasmic reticulum, peroxisome	60.41	64.38
VIT_04s0008g03220.t01	Wine grape	cytosol	65.81	64.16
PGSC0003DMT400011430	Potato	cytosol	63.5	61.14
Bra008947.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	61.18	61.03
CDX69743	Canola	cytosol, endoplasmic reticulum, golgi, plastid	61.18	61.03
Solyc08g066440.2.1	Tomato	cytosol, endoplasmic reticulum, plastid	63.24	60.89
AT5G11650.1	Thale cress	plastid	60.67	60.51
CDX97130	Canola	cytosol, endoplasmic reticulum, golgi, plastid	60.15	60.0
GSMUA_AchrUn_...	Banana	mitochondrion	63.24	56.94
TraesCS5D01G209300.2	Wheat	mitochondrion, plastid	47.56	47.19
TraesCS4D01G051900.2	Wheat	endoplasmic reticulum, golgi	45.5	46.21
TraesCS5D01G163000.1	Wheat	cytosol	24.16	31.44
TraesCS4D01G133100.1	Wheat	cytosol	24.42	30.35
TraesCS3D01G349100.1	Wheat	cytosol	23.14	30.1
TraesCS2D01G208700.1	Wheat	cytosol	24.68	29.09
TraesCS3D01G349000.1	Wheat	cytosol	23.65	28.84
TraesCS2D01G374700.1	Wheat	cytosol	24.16	27.49
TraesCS5D01G163100.1	Wheat	cytosol	22.36	25.97
TraesCS1D01G231500.1	Wheat	peroxisome	22.62	25.73
TraesCS5D01G299500.3	Wheat	plastid	24.42	25.47
TraesCS3D01G263200.2	Wheat	mitochondrion	24.16	25.0
TraesCS4D01G051100.1	Wheat	cytosol, golgi	20.31	24.31

Protein Annotations

EnsemblPlants:TraesCS3D01G142300.1	EnsemblPlantsGene:TraesCS3D01G142300	Gene3D:3.40.50.1820	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0005794	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:Hydrolase_4
InterPro:IPR029058	PANTHER:PTHR11614	PANTHER:PTHR11614:SF143	PFAM:PF12146	PRINTS:PR00111	SEG:seg
SUPFAM:SSF53474	TMHMM:TMhelix	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr3D:+:104213386..104217231

Molecular Weight (calculated)

42848.2 Da

IEP (calculated)

8.849

GRAVY (calculated)

0.022

Length

389 amino acids

Sequence
(BLAST)

001: MEMGGDEMMM TSGATGRIVP VFRSVLSRRA LLRLAVALHS LFLWLLLLVG RRRRPDAASP AEPGRLGKAR SRRRAAEEED VRRRRALAEE VPMVEDDADA
101: DGRTCGTFVI AGARRNALFC RVWAPAAGAE TRGILLIVHG LNEHSGRYLH FAEQLTSCGF GVYAMDWIGH GGSDGLHGYV PSLDYVIEDM EVLLDKIMLE
201: NPDVPCFLLG HSTGGAVVLK ASLYAHIRTR LEGIILTSPA VRVKPAHPIV GAVAPIFSLI APKFQFKGAN KRGIPVSRDP AALLAKYSDP LVYTGPIRVR
301: TGHEILRISS YLLHNLKKVT VPFVVLHGTA DRVTDPLASR ELYTEAASRH KDLRLYEGFL HDLLFEPERD EIAADIIGWM DRTLGLQAV

Best Arabidopsis Sequence Match ( AT5G11650.1 )
(BLAST)

001: MASTSAEMDQ LTSGASNRII FILRTLRKCL VFVLSLVLSL LLILRLRPRR RVSPLSSPED EAVPAPSRRW RRKMAWKLEE EDTARRRSLA EGVEMAGDGE
101: ISCSLFYGRR GNALFSRSWL PISGELRGIL IIIHGLNEHS GRYSQFAKQL NASNLGVYAM DWIGHGGSDG LHGYVPSLDY VVSDTEAFLE KIRSENPGVP
201: CFLFGHSTGG AVVLKAASSP SIEDMLAGIV LTSPALRVKP AHPIVGAIAP IFSLLAPRFQ FKGANKRGIP VSRDPEALLA KYSDPLVYTG PIRVRTGYEI
301: LRITAYLTRN FKSVTVPFFV LHGTEDKVTD PLASQDLYNQ APSVFKDIKL YDGFLHDLLF EPEREEVGRD IIDWMMNRLD DVNGSAASLW

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LYG5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.