CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
plastid 1
vacuole 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039416_P001	Maize	cytosol	91.83	92.75
TraesCS3D01G142300.1	Wheat	cytosol	78.96	82.01
TraesCS3A01G312100.1	Wheat	cytosol	78.96	82.01
TraesCS3B01G160100.1	Wheat	cytosol	78.47	81.49
Os01t0199400-01	Rice	cytosol, endoplasmic reticulum, peroxisome	78.71	80.51
HORVU3Hr1G027160.1	Barley	golgi, mitochondrion	77.72	76.96
GSMUA_Achr10P...	Banana	cytosol	55.45	74.92
TraesCS3B01G222200.1	Wheat	endoplasmic reticulum, plasma membrane	31.93	74.14
GSMUA_Achr8P20130_001	Banana	plastid	61.88	67.02
GSMUA_Achr7P13720_001	Banana	plastid	65.1	66.08
KRH62086	Soybean	plastid	61.14	65.34
KRH52771	Soybean	cytosol, endoplasmic reticulum, peroxisome	58.42	64.66
VIT_04s0008g03220.t01	Wine grape	cytosol	63.12	63.91
CDX69743	Canola	cytosol, endoplasmic reticulum, golgi, plastid	61.39	63.59
Bra008947.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	61.14	63.33
CDX97130	Canola	cytosol, endoplasmic reticulum, golgi, plastid	60.15	62.31
AT5G11650.1	Thale cress	plastid	59.9	62.05
PGSC0003DMT400011430	Potato	cytosol	61.14	61.14
Solyc08g066440.2.1	Tomato	cytosol, endoplasmic reticulum, plastid	61.14	61.14
GSMUA_AchrUn_...	Banana	mitochondrion	61.63	57.64
EER98863	Sorghum	plastid	46.53	45.97
EER90977	Sorghum	endoplasmic reticulum, golgi, plastid	43.56	44.9
EES03847	Sorghum	cytosol	23.51	30.74
OQU82666	Sorghum	endoplasmic reticulum, golgi	22.77	29.58
EER99555	Sorghum	cytosol	24.5	29.29
OQU87824	Sorghum	cytosol	21.78	29.24
EES00668	Sorghum	cytosol	23.76	27.59
KXG22743	Sorghum	cytosol	18.81	26.57
EES16469	Sorghum	cytosol	22.28	26.09
EES09069	Sorghum	cytosol	22.52	26.07
EES18085	Sorghum	cytosol	22.77	26.06
EES00674	Sorghum	cytosol	21.04	25.76
KXG33155	Sorghum	plastid	22.52	24.73
OQU91987	Sorghum	cytosol	22.77	24.08

Protein Annotations

Gene3D:3.40.50.1820	MapMan:35.1	EntrezGene:8080522	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	UniProt:C5XLT8
EnsemblPlants:EES00118	ProteinID:EES00118	ProteinID:EES00118.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005794	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016298	GO:GO:0016787
InterPro:Hydrolase_4	InterPro:IPR029058	PFAM:PF12146	PRINTS:PR00111	PANTHER:PTHR11614	PANTHER:PTHR11614:SF143
EnsemblPlantsGene:SORBI_3003G028900	SUPFAM:SSF53474	unigene:Sbi.1837	TMHMM:TMhelix	UniParc:UPI0001A843CA	RefSeq:XP_002454998.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:2540260..2544779

Molecular Weight (calculated)

44431.3 Da

IEP (calculated)

9.896

GRAVY (calculated)

-0.022

Length

404 amino acids

Sequence
(BLAST)

001: MERTGGGGGG RGDEMMMTSG ATGRIVPVFR SVLSRRALLR VAVALHSLFL WLLLLARGLR LRRAGSETSA SALEAGAGGG SWNARRRRRL QAAEEEDVRR
101: RRALAEEVPM EEVDRGTRWA TFLVTGARRN ALFCRLWAPA ADEMRGILVI IHGLNEHSGR YLHFAEQLTA CGFGVYAMDW IGHGGSDGLH GYVPSLDYVI
201: EDIEVLLDKI MMENPGVPCF LLGHSTGGAV VLKASLYPHI REKLEGIVLT SPALRVKPAH PIVGAVAPIF SLVAPKFQFK GANKRGIPVS RDPAALLAKY
301: SDPLVYTGPI RVRTGHEILR MSSYLLHSLK KVTVPFMVLH GTADRVTDPL ASRELYGAAA SMHKELRLYD GFLHDLLFEP ERDEVGAEII GWMDGMLRLR
401: RQTG

Best Arabidopsis Sequence Match ( AT5G11650.1 )
(BLAST)

001: MASTSAEMDQ LTSGASNRII FILRTLRKCL VFVLSLVLSL LLILRLRPRR RVSPLSSPED EAVPAPSRRW RRKMAWKLEE EDTARRRSLA EGVEMAGDGE
101: ISCSLFYGRR GNALFSRSWL PISGELRGIL IIIHGLNEHS GRYSQFAKQL NASNLGVYAM DWIGHGGSDG LHGYVPSLDY VVSDTEAFLE KIRSENPGVP
201: CFLFGHSTGG AVVLKAASSP SIEDMLAGIV LTSPALRVKP AHPIVGAIAP IFSLLAPRFQ FKGANKRGIP VSRDPEALLA KYSDPLVYTG PIRVRTGYEI
301: LRITAYLTRN FKSVTVPFFV LHGTEDKVTD PLASQDLYNQ APSVFKDIKL YDGFLHDLLF EPEREEVGRD IIDWMMNRLD DVNGSAASLW

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LYG5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.