CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d040681_P001	Maize	cytosol, mitochondrion	92.12	92.68
TraesCS4B01G051000.1	Wheat	cytosol	81.52	82.52
TraesCS4A01G263500.1	Wheat	cytosol	81.21	82.46
TraesCS4D01G051100.1	Wheat	cytosol, golgi	80.61	81.85
Os01t0317800-01	Rice	plasma membrane	80.0	80.24
GSMUA_Achr1P08950_001	Banana	peroxisome	70.3	70.09
KRH34878	Soybean	cytosol	64.24	65.23
VIT_13s0019g04260.t01	Wine grape	cytosol	63.33	63.53
CDY69863	Canola	cytosol	62.12	61.19
Bra020032.1-P	Field mustard	cytosol	61.82	60.9
CDY44908	Canola	cytosol	61.82	60.9
CDY13986	Canola	cytosol	61.21	60.3
AT5G19290.1	Thale cress	cytoskeleton, cytosol, plastid	60.0	60.0
Bra002224.1-P	Field mustard	cytosol	60.91	60.0
CDX92543	Canola	cytosol	60.61	59.0
Solyc05g056000.2.1	Tomato	cytosol	59.09	58.21
PGSC0003DMT400060321	Potato	cytosol	59.09	58.21
AT5G14980.1	Thale cress	plastid	55.45	55.96
CDX85571	Canola	plastid	54.55	54.88
EER99555	Sorghum	cytosol	41.21	40.24
EES09069	Sorghum	cytosol	35.45	33.52
EES16469	Sorghum	cytosol	34.55	33.04
EES03847	Sorghum	cytosol	30.91	33.01
OQU82666	Sorghum	endoplasmic reticulum, golgi	30.91	32.8
EES00668	Sorghum	cytosol	34.24	32.47
OQU87824	Sorghum	cytosol	29.39	32.23
EES18085	Sorghum	cytosol	34.24	32.01
KXG22743	Sorghum	cytosol	25.15	29.02
OQU91987	Sorghum	cytosol	32.12	27.75
KXG33155	Sorghum	plastid	26.97	24.18
EES00118	Sorghum	cytosol, nucleus, plastid, vacuole	25.76	21.04
EER90977	Sorghum	endoplasmic reticulum, golgi, plastid	24.24	20.41
EER98863	Sorghum	plastid	24.55	19.8

Protein Annotations

Gene3D:3.40.50.1820	MapMan:35.1	EntrezGene:8060363	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	UniProt:C5XIW4
EnsemblPlants:EES00674	ProteinID:EES00674	ProteinID:EES00674.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016298	GO:GO:0016787
InterPro:Hydrolase_4	InterPro:IPR029058	PFAM:PF12146	PRINTS:PR00111	PANTHER:PTHR11614	PANTHER:PTHR11614:SF101
EnsemblPlantsGene:SORBI_3003G150200	SUPFAM:SSF53474	UniParc:UPI0001A844C6	RefSeq:XP_002455554.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr3:+:15833855..15837585

Molecular Weight (calculated)

36384.5 Da

IEP (calculated)

6.878

GRAVY (calculated)

-0.127

Length

330 amino acids

Sequence
(BLAST)

001: MVHPIAEADE RSPFGRLTPD EFYARHGVTH STSSFVNPRG LRIFTQRWVP RGDGARVLGA VAVVHGFTGE SSWMVQLTAV HLAAAGFAVA ALDHQGHGFS
101: EGLQCHVPDI EPVLDDCDAA FAPFRADYPP PLPCFLYGES LGGAIALLLH LRNRDLWRDG AVLNGAMCGI SARFRPPWPL EHLLAAAAKV VPTWRVAFTR
201: GNIPERSFKV DWKRKLALAS PRRTTAPPRA ATALELLRVC RDLQQRFEEV KLPLLVVHGA EDTVCDPACV QELYTRAGSS DKTLRVYPEM WHQIIGEPEE
301: NVEKVFDEII DWLKARAATA TAAGAHHGEQ

Best Arabidopsis Sequence Match ( AT5G19290.1 )
(BLAST)

001: MGLHPISDAN EHNPFGSLTA DEFYAKHSVS HSSAFITNPR GLKLFTQWWS PLPPTKPIGI IAVVHGFTGE SSWFLQLTSI LFAKSGFITC AIDHQGHGFS
101: DGLIAHIPDI NPVVDDCISF FDDFRSRQTP SDLPCFLYSE SLGGAIALYI SLRQRGVWDG LILNGAMCGI SDKFKPPWPL EHLLFVVANL IPTWRVIPTR
201: GSIPDVSFKE PWKRKLAMAS PRRTVAKPRA ATAYELIRVC KDLQGRFEEV EVPLLIVHGG GDVVCDVACV EELHRRAISE DKTIKIYPEL WHQMIGESEE
301: KVDLVYGDML SWLKSRAERK ARAAVDGGAA

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8VZV6]
SUBAcon: [cytosol,cytoskeleton,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.