CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011619_P002	Maize	plastid	96.74	88.78
TraesCS3D01G263200.2	Wheat	mitochondrion	84.78	82.98
HORVU3Hr1G063840.1	Barley	mitochondrion, plastid	84.51	82.71
TraesCS3A01G263400.1	Wheat	mitochondrion, plastid	84.51	82.71
TraesCS3B01G296600.2	Wheat	plastid	83.7	81.91
Os01t0688200-01	Rice	plastid	85.33	81.35
GSMUA_Achr3P29490_001	Banana	plastid	72.83	70.9
GSMUA_Achr4P03690_001	Banana	mitochondrion	70.38	67.8
CDX79202	Canola	cytosol	27.72	56.98
VIT_01s0011g03620.t01	Wine grape	cytosol, plastid	63.86	56.35
KRH75362	Soybean	nucleus	58.15	54.31
Bra008307.1-P	Field mustard	cytosol, plastid	55.71	53.66
CDY40890	Canola	plastid	55.71	53.52
CDY38348	Canola	plastid	55.71	53.52
CDY40888	Canola	plastid	55.43	53.4
Solyc05g009390.2.1	Tomato	plastid	57.61	53.4
PGSC0003DMT400037702	Potato	cytosol	57.61	53.4
AT1G77420.1	Thale cress	cytosol	54.89	52.88
OQU91987	Sorghum	cytosol	50.0	48.17
Bra003685.1-P	Field mustard	cytosol	24.18	46.84
CDX68059	Canola	cytosol	24.18	46.84
OQU82666	Sorghum	endoplasmic reticulum, golgi	31.79	37.62
EES00668	Sorghum	cytosol	33.42	35.34
EES18085	Sorghum	cytosol	33.42	34.84
EES09069	Sorghum	cytosol	32.88	34.67
EES03847	Sorghum	cytosol	28.8	34.3
EES16469	Sorghum	cytosol	31.52	33.62
OQU87824	Sorghum	cytosol	26.9	32.89
KXG22743	Sorghum	cytosol	25.54	32.87
EER99555	Sorghum	cytosol	29.35	31.95
EES00674	Sorghum	cytosol	24.18	26.97
EER90977	Sorghum	endoplasmic reticulum, golgi, plastid	25.54	23.98
EER98863	Sorghum	plastid	25.27	22.74
EES00118	Sorghum	cytosol, nucleus, plastid, vacuole	24.73	22.52

Protein Annotations

Gene3D:3.40.50.1820	MapMan:35.1	UniProt:A0A1B6Q5I9	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	InterPro:Hydrolase_4
InterPro:IPR029058	EnsemblPlants:KXG33155	ProteinID:KXG33155	ProteinID:KXG33155.1	PFAM:PF12146	PRINTS:PR00111
PANTHER:PTHR11614	PANTHER:PTHR11614:SF94	EnsemblPlantsGene:SORBI_3003G261500	SUPFAM:SSF53474	UniParc:UPI0001C80BB7	SEG:seg

Description

hypothetical protein

Coordinates

chr3:-:59918503..59928471

Molecular Weight (calculated)

40585.2 Da

IEP (calculated)

8.275

GRAVY (calculated)

-0.102

Length

368 amino acids

Sequence
(BLAST)

001: MPPHMAAISH RIAAGSGPRV AVAAPPRPRA VVVGAAAKGA HRERTLEGAS DDLRAAAAQS LDWAPARRRV RAAFAPVLPT LDHCLFKMAP KEIQMEENYQ
101: TNSKGVEIFW KSWLPREGTA IKAALFFCHG YGDTCTFFFE GIAKRIAAAG YAVYAMDYPG FGMSYGLHGY IASFDGMVDH VIEQYARIRG MKEVCELPHF
201: LLGQSMGGAV ALKVHLKQQK EWDGVLLVAP MCKALSILSC LLPEAKLFPQ KDIGDLAFRD PRKRKVAEYN AISYSDQMRL RTAVELLKAT KDIESQLEKI
301: SSPLLILHGA ADMVTDPQVS KFLYEKASAK DKTLKLYEGS YHSILEGEPD ERISTAISDI ISWLDSHC

Best Arabidopsis Sequence Match ( AT1G77420.1 )
(BLAST)

001: MDRALTPRFD TPATLSPFRY RYGSSLAITR RFAPAIVCAK RSPIDGVSDE LNLIASQNLD QAPARRLARS AFVDLQLQLD HCLFKKAPSG IRTEEWYERN
101: SKGEDIFCKS WLPKSGDEIK AAVCFCHGYG STCTFFFDGI AKQIAGFGYG VYAIDHPGFG LSDGLHGHIP SFDDLADNAI EQFTKMKGRS ELRNLPRFLL
201: GQSMGGAVAL KIHLKEPQAW DGLILVAPMC KISEDVKPPP LVLKTLILMS TLFPKAKLFP KRDLSDFFFR DLSKRKLCEY DVICYDDQTR LKTAVELLNA
301: TRDIEMQVDK VSLPLLILHG DTDKVTDPTV SKFLHKHAVS QDKTLKLYPG GYHCILEGDT DENIFTVIND IVAWLDARVD PK

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FVW6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.