Factsheet for TraesCS3B01G296600.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G263200.2	Wheat	mitochondrion	98.67	98.67
TraesCS3A01G263400.1	Wheat	mitochondrion, plastid	98.4	98.4
HORVU3Hr1G063840.1	Barley	mitochondrion, plastid	98.14	98.14
Os01t0688200-01	Rice	plastid	88.03	85.75
KXG33155	Sorghum	plastid	81.91	83.7
Zm00001d011619_P002	Maize	plastid	84.84	79.55
GSMUA_Achr3P29490_001	Banana	plastid	72.07	71.69
GSMUA_Achr4P03690_001	Banana	mitochondrion	69.68	68.59
CDX79202	Canola	cytosol	29.26	61.45
VIT_01s0011g03620.t01	Wine grape	cytosol, plastid	65.96	59.47
KRH75362	Soybean	nucleus	59.04	56.35
CDY40888	Canola	plastid	56.65	55.76
Bra008307.1-P	Field mustard	cytosol, plastid	56.38	55.5
AT1G77420.1	Thale cress	cytosol	56.38	55.5
CDY40890	Canola	plastid	56.38	55.35
CDY38348	Canola	plastid	56.38	55.35
PGSC0003DMT400037702	Potato	cytosol	57.71	54.66
Solyc05g009390.2.1	Tomato	plastid	57.71	54.66
TraesCS5B01G291500.2	Wheat	plastid	51.86	52.28
Bra003685.1-P	Field mustard	cytosol	25.8	51.05
CDX68059	Canola	cytosol	25.8	51.05
TraesCS5B01G156100.1	Wheat	cytosol	31.91	40.13
TraesCS4B01G138400.1	Wheat	cytosol	31.12	37.86
TraesCS2B01G395400.1	Wheat	cytosol	34.31	37.72
TraesCS5B01G156000.1	Wheat	cytosol	31.91	35.82
TraesCS3B01G388000.1	Wheat	cytosol	27.93	35.12
TraesCS1B01G243700.2	Wheat	peroxisome	33.24	33.33
TraesCS2B01G229300.1	Wheat	cytosol	29.26	33.23
TraesCS3B01G222200.1	Wheat	endoplasmic reticulum, plasma membrane	13.83	29.89
TraesCS4B01G051000.1	Wheat	cytosol	24.47	28.22
TraesCS3B01G160100.1	Wheat	cytosol	25.0	24.16
TraesCS5B01G201400.1	Wheat	mitochondrion, plastid	25.0	24.1
TraesCS4B01G051600.1	Wheat	endoplasmic reticulum, golgi	24.2	23.7

Protein Annotations

EnsemblPlants:TraesCS3B01G296600.2	EnsemblPlantsGene:TraesCS3B01G296600	Gene3D:3.40.50.1820	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:Hydrolase_4
InterPro:IPR029058	PANTHER:PTHR11614	PANTHER:PTHR11614:SF94	PFAM:PF12146	PRINTS:PR00111	SEG:seg
SUPFAM:SSF53474	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr3B:+:475827230..475830452

Molecular Weight (calculated)

41248.0 Da

IEP (calculated)

8.374

GRAVY (calculated)

-0.095

Length

376 amino acids

Sequence
(BLAST)

001: MAAISQLQRI AGPGHAGAPR PGTVRRASVA VAAGKAPLPR LEGASEELRA AAAQSLDWAP ARRRVRGAFA PVLPTLDHCL FKMAPKGIQM GENFETNSKG
101: VEIFWKSWLP REGTPTKAAL FFCHGYGDTC TFFFEGVAKR IAAAGYAVYA MDYPGFGLSY GLHGYIASFD GMVDHVIEQY ARIRGRKDVQ GLPYFLLGQS
201: MGGAVALKVH LKQPKEWDGV LLVAPMCKIS EDVTPPALVL KALSILSCLL PEAKLFPQKD IGDLGFRDPV KRKLCEYNAI SYNDQMRLRT AVELLKATKD
301: IESQLEKICS PLLILHGAAD QVTDPHVSQF LYEKANTKDK TLKLYEGAYH SILEGEPDDR ISTAIKDIIS WLDSHC

Best Arabidopsis Sequence Match ( AT1G77420.1 )
(BLAST)

001: MDRALTPRFD TPATLSPFRY RYGSSLAITR RFAPAIVCAK RSPIDGVSDE LNLIASQNLD QAPARRLARS AFVDLQLQLD HCLFKKAPSG IRTEEWYERN
101: SKGEDIFCKS WLPKSGDEIK AAVCFCHGYG STCTFFFDGI AKQIAGFGYG VYAIDHPGFG LSDGLHGHIP SFDDLADNAI EQFTKMKGRS ELRNLPRFLL
201: GQSMGGAVAL KIHLKEPQAW DGLILVAPMC KISEDVKPPP LVLKTLILMS TLFPKAKLFP KRDLSDFFFR DLSKRKLCEY DVICYDDQTR LKTAVELLNA
301: TRDIEMQVDK VSLPLLILHG DTDKVTDPTV SKFLHKHAVS QDKTLKLYPG GYHCILEGDT DENIFTVIND IVAWLDARVD PK

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FVW6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.