Factsheet for TraesCS5B01G201400.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 5
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G209300.2	Wheat	mitochondrion, plastid	98.72	98.21
TraesCS5A01G202900.1	Wheat	mitochondrion, plastid	98.21	98.21
Os09t0394700-01	Rice	plastid	83.85	82.37
EER98863	Sorghum	plastid	82.05	78.24
Zm00001d020380_P002	Maize	plastid	81.54	76.44
KRH60583	Soybean	peroxisome	44.87	61.62
KRH39013	Soybean	cytosol, mitochondrion, peroxisome, plastid	26.15	58.29
TraesCS3B01G222200.1	Wheat	endoplasmic reticulum, plasma membrane	25.9	58.05
KRH41883	Soybean	endoplasmic reticulum, golgi	50.51	54.72
Bra003843.1-P	Field mustard	golgi, vacuole	52.31	53.4
KRH48707	Soybean	endoplasmic reticulum, golgi	51.28	52.91
CDX83852	Canola	plastid	50.51	51.98
Solyc03g098020.2.1	Tomato	plastid	54.1	51.72
CDX96478	Canola	plastid	47.18	50.83
CDX96722	Canola	plastid	50.51	50.77
PGSC0003DMT400083974	Potato	plastid	53.08	50.74
AT1G18360.1	Thale cress	mitochondrion, plastid	49.49	50.52
VIT_17s0000g01010.t01	Wine grape	plastid	51.54	50.25
Bra015989.1-P	Field mustard	plastid	51.79	49.63
CDX72991	Canola	plastid	51.28	49.14
VIT_17s0000g01070.t01	Wine grape	plastid	50.0	48.87
Bra016558.1-P	Field mustard	cytosol, nucleus, plastid	48.72	48.47
TraesCS4B01G051600.1	Wheat	endoplasmic reticulum, golgi	47.18	47.92
TraesCS3B01G160100.1	Wheat	cytosol	47.18	47.3
CDY11104	Canola	plastid	52.56	44.37
CDX68225	Canola	mitochondrion	52.31	43.87
AT1G73480.1	Thale cress	mitochondrion, plastid	51.28	43.2
TraesCS2B01G229300.1	Wheat	cytosol	26.15	30.82
TraesCS5B01G156100.1	Wheat	cytosol	23.59	30.77
TraesCS4B01G138400.1	Wheat	cytosol	23.59	29.77
TraesCS3B01G388000.1	Wheat	cytosol	22.56	29.43
TraesCS2B01G395400.1	Wheat	cytosol	24.36	27.78
TraesCS5B01G156000.1	Wheat	cytosol	23.08	26.87
TraesCS3B01G296600.2	Wheat	plastid	24.1	25.0
TraesCS5B01G291500.2	Wheat	plastid	23.33	24.4
TraesCS1B01G243700.2	Wheat	peroxisome	23.33	24.27
TraesCS4B01G051000.1	Wheat	cytosol	18.97	22.7

Protein Annotations

EnsemblPlants:TraesCS5B01G201400.1	EnsemblPlantsGene:TraesCS5B01G201400	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:Hydrolase_4
InterPro:IPR029058	PANTHER:PTHR11614	PANTHER:PTHR11614:SF97	PFAM:PF12146	PRINTS:PR00111	SEG:seg
SUPFAM:SSF53474	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr5B:-:364135540..364141456

Molecular Weight (calculated)

42984.6 Da

IEP (calculated)

7.807

GRAVY (calculated)

-0.176

Length

390 amino acids

Sequence
(BLAST)

001: MWAPAASPAG RAPRPPPRLP AVVRVVVPLP VAARVRGLPM PPSRLCLAAP RASEMAAAAE DGEGEGERRW WRGAEEMDAA VRRELAIRRL QQEAEEAGTG
101: RSRREFAVFE TARGDTLFTQ SWTPASADPV RGIVVLLHGL NEHSGRYDHF AKLLNDQGLK VYAMDWIGHG GSDGAHGYVS SLDHAVGDLK EFLEDVVLEE
201: NYGLPCFLFG HSTGGAIVLK AALDPCVEVH IEGLILTSPA IHVQPSHPII KVVAPIFSVL APKYRVSALH KRGPPVSRDP EALKIKYADP LVYTGPIRVR
301: TGNEILRISS YLQRNLSRVT VPFLVLHGTA DTITDPRASQ RLYQASMSTH KSIKLYDGYL HDLLFEPERD DIANDIITWL SSRLNALHRW

Best Arabidopsis Sequence Match ( AT1G18360.1 )
(BLAST)

001: MICSSKGTVV IATRSSFPRL LNRIQNRNDV PISVIATRRS SMSVEAFPMR LKSSQKKRKM NIGCGVSPSS PTTTVVDEEV AIRRKLAMRR VLEDNGGDGS
101: SVRDFSLFTT KRGDTLFTQS WTPVDSAKNR GLVVLLHGLN EHSGRYSDFA KQLNVNGFKV YGIDWIGHGG SDGLHAYVPS LDYAVADLKS FIEKVIAENP
201: GLPCFCIGHS TGGAIILKAM LDAKIEARVS GIVLTSPAVG VQPTYPIFGV IAPFLSFLIP RYQLSAAKKK IMPVSRDPEA LLAKYSDPLV YTGFIRARTG
301: NEILRLGAHL LQNLNRIKVP FLVMHGTADT VTDPKGTQKL YNEASSSDKS IKLYDGLLHD LLFEPERETI AGVILDWLNR RV

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8VYJ0]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.