CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d020380_P002	Maize	plastid	91.93	90.38
TraesCS5A01G202900.1	Wheat	mitochondrion, plastid	78.48	82.31
Os09t0394700-01	Rice	plastid	79.71	82.12
TraesCS5B01G201400.1	Wheat	mitochondrion, plastid	78.24	82.05
TraesCS5D01G209300.2	Wheat	mitochondrion, plastid	78.24	81.63
KRH60583	Soybean	peroxisome	42.3	60.92
KRH39013	Soybean	cytosol, mitochondrion, peroxisome, plastid	24.45	57.14
Bra003843.1-P	Field mustard	golgi, vacuole	51.59	55.24
KRH41883	Soybean	endoplasmic reticulum, golgi	47.68	54.17
CDX83852	Canola	plastid	49.39	53.3
KRH48707	Soybean	endoplasmic reticulum, golgi	49.14	53.17
Solyc03g098020.2.1	Tomato	plastid	52.81	52.94
PGSC0003DMT400083974	Potato	plastid	52.57	52.7
Bra015989.1-P	Field mustard	plastid	51.83	52.09
CDX96722	Canola	plastid	49.39	52.06
VIT_17s0000g01010.t01	Wine grape	plastid	50.61	51.75
CDX72991	Canola	plastid	51.34	51.6
AT1G18360.1	Thale cress	mitochondrion, plastid	48.17	51.57
CDX96478	Canola	plastid	45.48	51.38
VIT_17s0000g01070.t01	Wine grape	plastid	48.9	50.13
EER90977	Sorghum	endoplasmic reticulum, golgi, plastid	47.92	50.0
Bra016558.1-P	Field mustard	cytosol, nucleus, plastid	46.21	48.21
CDY11104	Canola	plastid	52.81	46.75
EES00118	Sorghum	cytosol, nucleus, plastid, vacuole	45.97	46.53
CDX68225	Canola	mitochondrion	52.08	45.81
AT1G73480.1	Thale cress	mitochondrion, plastid	51.1	45.14
OQU87824	Sorghum	cytosol	22.74	30.9
OQU82666	Sorghum	endoplasmic reticulum, golgi	23.47	30.87
EER99555	Sorghum	cytosol	24.69	29.88
EES03847	Sorghum	cytosol	21.27	28.16
KXG22743	Sorghum	cytosol	19.56	27.97
EES00668	Sorghum	cytosol	22.98	27.01
EES09069	Sorghum	cytosol	22.74	26.65
EES16469	Sorghum	cytosol	22.0	26.09
EES18085	Sorghum	cytosol	22.25	25.78
KXG33155	Sorghum	plastid	22.74	25.27
EES00674	Sorghum	cytosol	19.8	24.55
OQU91987	Sorghum	cytosol	22.49	24.08

Protein Annotations

Gene3D:3.40.50.1820	MapMan:35.1	EntrezGene:8056227	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	UniProt:C5XC39
EnsemblPlants:EER98863	ProteinID:EER98863	ProteinID:EER98863.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016298	GO:GO:0016787
InterPro:Hydrolase_4	InterPro:IPR029058	PFAM:PF12146	PRINTS:PR00111	PANTHER:PTHR11614	PANTHER:PTHR11614:SF97
EnsemblPlantsGene:SORBI_3002G194000	SUPFAM:SSF53474	unigene:Sbi.7371	UniParc:UPI0001A83F55	RefSeq:XP_002462342.1	SEG:seg

Description

hypothetical protein

Coordinates

chr2:-:58092030..58097326

Molecular Weight (calculated)

44826.7 Da

IEP (calculated)

7.014

GRAVY (calculated)

-0.200

Length

409 amino acids

Sequence
(BLAST)

001: MWAPPAASPT TGAIPSLRPS RAAEVRVLVT LRPGAARPQD QPRRRLCLAV PPPAPEMASA AAEGDGEGEE EEDVVVVVQG GTERKKAVEM DAAVRRELAI
101: RRLREEAAAE ATEAGTRKGR SRRDFAVFET ARGDALFTQS WTPAAADRLK GVVVLLHGLN EHSGRYNHFA KLLNDQGLKV YAMDWIGHGG SDGVHGYVSS
201: LDHAVGDLKE FLEDVVLEEN RGLPCFLFGH STGGAIVLKA VLDPFVELHV EGVVLTSPAI HVQPSHPIIK VVAPIFSMLA PKYRVSALHK RGPPVSRDPE
301: ALKMKYSDPL VYTGPIRVRT GNEILRISSF LQRNLSRVTV PFLVLHGTAD TITDPRASER LYQASMSTNK SIKLYDGYLH DLLFEPERDD IANDIINWLS
401: ARLDVLQGW

Best Arabidopsis Sequence Match ( AT1G73480.1 )
(BLAST)

001: MICSSKGTIL IARGKNSNTI PRLPLKGSST NYANRIQIRN PISVKTFRRS SSSSMAVETM SMGSDSSTLI LTSGASGRVR VLFSMRELKR LVTIIQSLIL
101: FLLLPFRVVV WRRRTGAVVI RDDKQERKVW SPPQIVVRKR NIGGESSVSP PSVPAAVVDG EVAVRRELAI KRVLEDEGGD GSSVRDYSLF TTKRGDTLFS
201: QSWSPLSPNH RGLIVLLHGL NEHSGRYSDF AKQLNANGFK VYGIDWIGHG GSDGLHAYVP SLDYAVTDLK SFLEKVFTEN PGLPCFCFGH STGGAIILKA
301: MLDPKIESRV SGIALTSPAV GVQPSHPIFA VLAPIMAFLL PRYQISAANK KGMPVSRDPA ALIAKYSDPL VFTGSIRVKT GYEILRITAH LQQNLNKVKV
401: PFLVMHGTDD TVTDPSASKK LYEEAASSDK SLKLYDGLLH DLLFEPEREI IAGAILDWLN QRV

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q94AM5]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.