Factsheet for TraesCS5A01G202900.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 5
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G201400.1	Wheat	mitochondrion, plastid	98.21	98.21
TraesCS5D01G209300.2	Wheat	mitochondrion, plastid	98.46	97.96
Os09t0394700-01	Rice	plastid	84.62	83.12
EER98863	Sorghum	plastid	82.31	78.48
Zm00001d020380_P002	Maize	plastid	81.79	76.68
KRH60583	Soybean	peroxisome	44.87	61.62
KRH39013	Soybean	cytosol, mitochondrion, peroxisome, plastid	26.15	58.29
KRH41883	Soybean	endoplasmic reticulum, golgi	50.51	54.72
Bra003843.1-P	Field mustard	golgi, vacuole	52.56	53.66
KRH48707	Soybean	endoplasmic reticulum, golgi	51.79	53.44
CDX83852	Canola	plastid	50.51	51.98
Solyc03g098020.2.1	Tomato	plastid	53.85	51.47
CDX96478	Canola	plastid	47.18	50.83
AT1G18360.1	Thale cress	mitochondrion, plastid	49.74	50.79
CDX96722	Canola	plastid	50.51	50.77
PGSC0003DMT400083974	Potato	plastid	52.82	50.49
VIT_17s0000g01010.t01	Wine grape	plastid	51.54	50.25
Bra015989.1-P	Field mustard	plastid	52.05	49.88
CDX72991	Canola	plastid	51.54	49.39
VIT_17s0000g01070.t01	Wine grape	plastid	50.0	48.87
Bra016558.1-P	Field mustard	cytosol, nucleus, plastid	48.72	48.47
TraesCS4A01G263200.1	Wheat	endoplasmic reticulum, golgi	47.44	48.43
TraesCS3A01G312100.1	Wheat	cytosol	47.69	47.81
CDY11104	Canola	plastid	52.82	44.59
CDX68225	Canola	mitochondrion	52.56	44.09
AT1G73480.1	Thale cress	mitochondrion, plastid	51.54	43.41
TraesCS2A01G202200.1	Wheat	cytosol	27.18	32.02
TraesCS5A01G157600.2	Wheat	cytosol	23.33	30.43
TraesCS4A01G178300.1	Wheat	cytosol	23.85	29.62
TraesCS3A01G355100.1	Wheat	cytosol	22.56	29.43
TraesCS3A01G355000.1	Wheat	cytosol	21.03	28.98
TraesCS2A01G378400.1	Wheat	cytosol	24.36	27.78
TraesCS5A01G157700.1	Wheat	cytosol	23.59	27.46
TraesCS3A01G263400.1	Wheat	mitochondrion, plastid	24.62	25.53
TraesCS5A01G292100.1	Wheat	plastid	23.33	24.4
TraesCS1A01G230500.1	Wheat	golgi, plastid	22.56	24.11
TraesCS4A01G263500.1	Wheat	cytosol	19.49	23.38

Protein Annotations

EnsemblPlants:TraesCS5A01G202900.1	EnsemblPlantsGene:TraesCS5A01G202900	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:Hydrolase_4
InterPro:IPR029058	PANTHER:PTHR11614	PANTHER:PTHR11614:SF97	PFAM:PF12146	PRINTS:PR00111	SEG:seg
SUPFAM:SSF53474	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr5A:-:410507897..410514703

Molecular Weight (calculated)

43069.7 Da

IEP (calculated)

7.807

GRAVY (calculated)

-0.173

Length

390 amino acids

Sequence
(BLAST)

001: MWAPAASPAG RAPRPPLRLP AVVRVVVPLP VAARARRLPL QPSRLCLAAP RASEMAAAAE DGEGEGERRW WRGAEEMDAA VRRELAIRRL QEEAEEAGTG
101: RSRREFAVFE TARGDTLFTQ SWTPAAADPV RGIVVLLHGL NEHSGRYDHF AKLLNDQGLK VYAMDWIGHG GSDGAHGYVS SLDHAVGDLK EFLEDVVLEE
201: NYGLPCFLFG HSTGGAIVLK AALDPCVEVH IEGLILTSPA IHVQPSHPII KVVAPIFSVL APKYRVSALH KRGPPVSRDP EALKIKYADP LVYTGPIRVR
301: TGNEILRISS YLQRNLSRVT VPFLVLHGTA DTITDPRASQ RLYQASMSTH KSIKLYDGYL HDLLFEPERD DIANDIITWL SSRLNALHRW

Best Arabidopsis Sequence Match ( AT1G73480.1 )
(BLAST)

001: MICSSKGTIL IARGKNSNTI PRLPLKGSST NYANRIQIRN PISVKTFRRS SSSSMAVETM SMGSDSSTLI LTSGASGRVR VLFSMRELKR LVTIIQSLIL
101: FLLLPFRVVV WRRRTGAVVI RDDKQERKVW SPPQIVVRKR NIGGESSVSP PSVPAAVVDG EVAVRRELAI KRVLEDEGGD GSSVRDYSLF TTKRGDTLFS
201: QSWSPLSPNH RGLIVLLHGL NEHSGRYSDF AKQLNANGFK VYGIDWIGHG GSDGLHAYVP SLDYAVTDLK SFLEKVFTEN PGLPCFCFGH STGGAIILKA
301: MLDPKIESRV SGIALTSPAV GVQPSHPIFA VLAPIMAFLL PRYQISAANK KGMPVSRDPA ALIAKYSDPL VFTGSIRVKT GYEILRITAH LQQNLNKVKV
401: PFLVMHGTDD TVTDPSASKK LYEEAASSDK SLKLYDGLLH DLLFEPEREI IAGAILDWLN QRV

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q94AM5]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.