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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid

Predictor Summary:
  • plastid 6
  • mitochondrion 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra003843.1-P Field mustard golgi, vacuole 74.51 90.31
CDY11104 Canola plastid 87.04 87.23
CDX72991 Canola plastid 76.46 86.98
Bra015989.1-P Field mustard plastid 76.24 86.73
CDX68225 Canola mitochondrion 87.04 86.67
AT1G18360.1 Thale cress mitochondrion, plastid 62.85 76.18
CDX96478 Canola plastid 52.48 67.13
KRH60583 Soybean peroxisome 40.82 66.55
PGSC0003DMT400083974 Potato plastid 57.45 65.2
VIT_17s0000g01010.t01 Wine grape plastid 55.94 64.75
Solyc03g098020.2.1 Tomato plastid 57.02 64.71
KRH39013 Soybean cytosol, mitochondrion, peroxisome, plastid 24.41 64.57
KRH41883 Soybean endoplasmic reticulum, golgi 50.11 64.44
VIT_17s0000g01070.t01 Wine grape plastid 54.64 63.41
KRH48707 Soybean endoplasmic reticulum, golgi 50.97 62.43
GSMUA_Achr10P... Banana extracellular 32.83 60.08
Os03t0719400-01 Rice endoplasmic reticulum, golgi 47.52 56.12
EER90977 Sorghum endoplasmic reticulum, golgi, plastid 46.44 54.85
TraesCS4D01G051900.2 Wheat endoplasmic reticulum, golgi 45.36 54.83
TraesCS4A01G263200.1 Wheat endoplasmic reticulum, golgi 45.14 54.71
TraesCS4B01G051600.1 Wheat endoplasmic reticulum, golgi 45.36 54.69
Zm00001d013406_P002 Maize endoplasmic reticulum, golgi, mitochondrion 45.79 54.5
Zm00001d033797_P002 Maize endoplasmic reticulum, golgi 46.22 54.31
HORVU4Hr1G008550.3 Barley endoplasmic reticulum, golgi 44.49 54.07
AT5G11650.1 Thale cress plastid 44.49 52.82
TraesCS5A01G202900.1 Wheat mitochondrion, plastid 43.41 51.54
TraesCS5B01G201400.1 Wheat mitochondrion, plastid 43.2 51.28
EER98863 Sorghum plastid 45.14 51.1
TraesCS5D01G209300.2 Wheat mitochondrion, plastid 43.2 51.02
Os09t0394700-01 Rice plastid 43.2 50.38
Zm00001d020380_P002 Maize plastid 44.71 49.76
AT2G39410.2 Thale cress cytosol 22.25 32.49
AT1G11090.1 Thale cress cytosol 22.68 32.41
AT2G39420.1 Thale cress cytosol 22.03 32.18
AT2G39400.1 Thale cress cytosol 20.3 30.23
AT3G55180.1 Thale cress cytosol 19.65 29.17
AT3G55190.1 Thale cress cytosol 19.22 27.9
AT5G16120.4 Thale cress mitochondrion 22.89 27.68
AT5G19290.1 Thale cress cytoskeleton, cytosol, plastid 19.22 26.97
AT5G14980.1 Thale cress plastid 19.01 26.91
AT1G77420.1 Thale cress cytosol 21.6 26.18
AT1G52760.1 Thale cress cytosol 18.36 25.6
AT3G62860.1 Thale cress cytosol 19.22 25.57
AT2G47630.1 Thale cress cytosol 18.79 24.79
Protein Annotations
Gene3D:3.40.50.1820MapMan:35.1EntrezGene:843683InterPro:AB_hydrolaseProteinID:AEE35467.1ArrayExpress:AT1G73480
EnsemblPlantsGene:AT1G73480RefSeq:AT1G73480TAIR:AT1G73480RefSeq:AT1G73480-TAIR-GEnsemblPlants:AT1G73480.1TAIR:AT1G73480.1
EMBL:AY045929EMBL:BT001959GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0006629GO:GO:0008150GO:GO:0008152GO:GO:0009507
GO:GO:0009536GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0047372InterPro:Hydrolase_4
InterPro:IPR029058RefSeq:NP_565066.1PFAM:PF12146PO:PO:0000005PO:PO:0000013PO:PO:0000037
PO:PO:0000084PO:PO:0000230PO:PO:0000293PO:PO:0001016PO:PO:0001017PO:PO:0001054
PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095
PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616
PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025
PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047
PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022
PO:PO:0025195PO:PO:0025281PANTHER:PTHR11614PANTHER:PTHR11614:SF114UniProt:Q94AM5MEROPS:S33.A12
SUPFAM:SSF53474TMHMM:TMhelixUniParc:UPI000000BD68SEG:seg::
Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q94AM5]
Coordinates
chr1:+:27628678..27632840
Molecular Weight (calculated)
50769.6 Da
IEP (calculated)
10.293
GRAVY (calculated)
-0.052
Length
463 amino acids
Sequence
(BLAST)
001: MICSSKGTIL IARGKNSNTI PRLPLKGSST NYANRIQIRN PISVKTFRRS SSSSMAVETM SMGSDSSTLI LTSGASGRVR VLFSMRELKR LVTIIQSLIL
101: FLLLPFRVVV WRRRTGAVVI RDDKQERKVW SPPQIVVRKR NIGGESSVSP PSVPAAVVDG EVAVRRELAI KRVLEDEGGD GSSVRDYSLF TTKRGDTLFS
201: QSWSPLSPNH RGLIVLLHGL NEHSGRYSDF AKQLNANGFK VYGIDWIGHG GSDGLHAYVP SLDYAVTDLK SFLEKVFTEN PGLPCFCFGH STGGAIILKA
301: MLDPKIESRV SGIALTSPAV GVQPSHPIFA VLAPIMAFLL PRYQISAANK KGMPVSRDPA ALIAKYSDPL VFTGSIRVKT GYEILRITAH LQQNLNKVKV
401: PFLVMHGTDD TVTDPSASKK LYEEAASSDK SLKLYDGLLH DLLFEPEREI IAGAILDWLN QRV
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.