Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003843.1-P | Field mustard | golgi, vacuole | 81.39 | 98.43 |
| CDX68225 | Canola | mitochondrion | 96.32 | 95.7 |
| CDX72991 | Canola | plastid | 77.06 | 87.47 |
| AT1G73480.1 | Thale cress | mitochondrion, plastid | 87.23 | 87.04 |
| CDX83852 | Canola | plastid | 59.96 | 73.09 |
| CDX96722 | Canola | plastid | 60.61 | 72.16 |
| CDX96478 | Canola | plastid | 54.98 | 70.17 |
| KRH60583 | Soybean | peroxisome | 40.48 | 65.85 |
| VIT_17s0000g01010.t01 | Wine grape | plastid | 56.71 | 65.5 |
| PGSC0003DMT400083974 | Potato | plastid | 57.79 | 65.44 |
| Solyc03g098020.2.1 | Tomato | plastid | 57.36 | 64.95 |
| KRH39013 | Soybean | cytosol, mitochondrion, peroxisome, plastid | 24.46 | 64.57 |
| KRH41883 | Soybean | endoplasmic reticulum, golgi | 49.57 | 63.61 |
| VIT_17s0000g01070.t01 | Wine grape | plastid | 54.55 | 63.16 |
| KRH48707 | Soybean | endoplasmic reticulum, golgi | 50.65 | 61.9 |
| GSMUA_Achr10P... | Banana | extracellular | 33.33 | 60.87 |
| Os03t0719400-01 | Rice | endoplasmic reticulum, golgi | 46.75 | 55.1 |
| TraesCS4D01G051900.2 | Wheat | endoplasmic reticulum, golgi | 45.67 | 55.09 |
| TraesCS4A01G263200.1 | Wheat | endoplasmic reticulum, golgi | 45.45 | 54.97 |
| TraesCS4B01G051600.1 | Wheat | endoplasmic reticulum, golgi | 45.67 | 54.95 |
| EER90977 | Sorghum | endoplasmic reticulum, golgi, plastid | 46.1 | 54.34 |
| HORVU4Hr1G008550.3 | Barley | endoplasmic reticulum, golgi | 44.81 | 54.33 |
| Zm00001d013406_P002 | Maize | endoplasmic reticulum, golgi, mitochondrion | 45.24 | 53.73 |
| Zm00001d033797_P002 | Maize | endoplasmic reticulum, golgi | 45.67 | 53.55 |
| TraesCS5A01G202900.1 | Wheat | mitochondrion, plastid | 44.59 | 52.82 |
| EER98863 | Sorghum | plastid | 46.75 | 52.81 |
| TraesCS5B01G201400.1 | Wheat | mitochondrion, plastid | 44.37 | 52.56 |
| TraesCS5D01G209300.2 | Wheat | mitochondrion, plastid | 44.37 | 52.3 |
| Os09t0394700-01 | Rice | plastid | 44.59 | 51.89 |
| Zm00001d020380_P002 | Maize | plastid | 46.32 | 51.44 |
| CDX69743 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 42.86 | 50.77 |
| CDX97130 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 42.21 | 50.0 |
| CDY20979 | Canola | cytosol | 22.51 | 32.3 |
| CDY20587 | Canola | cytosol | 22.29 | 32.09 |
| CDY24963 | Canola | cytosol | 21.86 | 31.76 |
| CDY72172 | Canola | cytosol | 10.61 | 31.21 |
| CDX93264 | Canola | cytosol | 21.21 | 30.82 |
| CDY07008 | Canola | cytosol | 21.0 | 30.5 |
| CDX73397 | Canola | cytosol | 19.91 | 30.26 |
| CDY40205 | Canola | cytosol | 19.91 | 30.26 |
| CDX79202 | Canola | cytosol | 11.69 | 30.17 |
| CDY07006 | Canola | cytosol | 19.48 | 28.94 |
| CDY07651 | Canola | cytosol | 21.86 | 27.98 |
| CDX76667 | Canola | cytosol | 20.35 | 27.81 |
| CDY07007 | Canola | cytosol | 13.64 | 27.75 |
| CDY62163 | Canola | plastid | 12.77 | 27.06 |
| CDY69863 | Canola | cytosol | 19.48 | 26.87 |
| CDX69469 | Canola | mitochondrion | 20.78 | 26.59 |
| CDY44908 | Canola | cytosol | 19.26 | 26.57 |
| CDY72184 | Canola | cytosol | 18.61 | 26.22 |
| CDY62199 | Canola | cytosol | 18.61 | 26.22 |
| CDX76116 | Canola | cytosol | 19.48 | 26.01 |
| CDY40888 | Canola | plastid | 21.43 | 25.92 |
| CDY13986 | Canola | cytosol | 18.61 | 25.67 |
| CDX92543 | Canola | cytosol | 18.83 | 25.66 |
| CDX85571 | Canola | plastid | 18.18 | 25.61 |
| CDY38348 | Canola | plastid | 21.21 | 25.59 |
| CDY40890 | Canola | plastid | 21.21 | 25.59 |
| CDY26499 | Canola | mitochondrion | 20.56 | 25.4 |
| CDX95729 | Canola | cytosol | 18.83 | 25.07 |
| CDY27476 | Canola | cytosol | 18.83 | 25.07 |
| CDX83323 | Canola | cytosol | 18.83 | 25.07 |
| CDY55538 | Canola | cytosol | 18.83 | 25.0 |
| CDX93957 | Canola | cytosol | 16.02 | 24.58 |
| CDX89152 | Canola | mitochondrion | 19.26 | 23.99 |
| CDY02917 | Canola | cytosol, endoplasmic reticulum, vacuole | 19.05 | 23.91 |
| CDX68059 | Canola | cytosol | 9.74 | 23.68 |
| CDY11452 | Canola | cytosol | 17.75 | 21.58 |
| CDX85514 | Canola | cytosol | 22.51 | 16.88 |
| CDY38132 | Canola | mitochondrion | 21.86 | 16.69 |
| CDX93265 | Canola | cytosol | 19.48 | 14.93 |
Protein Annotations
| EnsemblPlants:CDY11104 | EnsemblPlantsGene:GSBRNA2T00049083001 | Gene3D:3.40.50.1820 | GO:A0A078FDU2 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:AB_hydrolase | InterPro:Hydrolase_4 | InterPro:IPR029058 | PANTHER:PTHR11614 | PANTHER:PTHR11614:SF114 |
| PFAM:PF12146 | ProteinID:CDY11104 | ProteinID:CDY11104.1 | SEG:seg | SUPFAM:SSF53474 | TMHMM:TMhelix |
| UniParc:UPI0004EF4D47 | UniProt:A0A078FDU2 | MapMan:35.1 | : | : | : |
Description
BnaC06g23560DBnaC06g23560D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FDU2]
Coordinates
chrLK032009:-:322037..325203
Molecular Weight (calculated)
50770.5 Da
IEP (calculated)
10.006
GRAVY (calculated)
-0.023
Length
462 amino acids
Sequence
(BLAST)
(BLAST)
001: MICSSKGTIL IYRGKDSTFR LPVTVSSSNQ FRNNNLPITV TTFRRSLPSS SSSMAVETMS DTSTLLLTSG ASGRVRALFS MRELKRLVTI IHALILFILL
101: PFRVVVWRRR SGAVVIRDEK QERKVWSPPQ IVVRKRGAGG SESGCSVAPP SVPAAVVDED VAVRRELAMR RVLEDEGGDG SSVRDFSLFP TKRGDTLFTQ
201: SWSPVSPNHR GLIVLLHGLN EHSGRYSDFA KQLNANGFKV YGIDWIGHGG SDGLHAYVPS LDYAVEDLKS FLEKVFTENP GLPCFCIGHS TGGAIILKAM
301: LDPKIESRVS GIVLTSPAVG VQPSHPIFTV LAPIVAFLLP RYQFSAANKK GMPVSRDPQA LVTKYSDPLV FTGSIRVKTG YEILRIAAHL QQNLNKVKVP
401: FLVMHGTADT VTDPNASKRL YEEASSSDKS IKLFDGLLHD LLFEPEREII AGVILDWLNQ RV
101: PFRVVVWRRR SGAVVIRDEK QERKVWSPPQ IVVRKRGAGG SESGCSVAPP SVPAAVVDED VAVRRELAMR RVLEDEGGDG SSVRDFSLFP TKRGDTLFTQ
201: SWSPVSPNHR GLIVLLHGLN EHSGRYSDFA KQLNANGFKV YGIDWIGHGG SDGLHAYVPS LDYAVEDLKS FLEKVFTENP GLPCFCIGHS TGGAIILKAM
301: LDPKIESRVS GIVLTSPAVG VQPSHPIFTV LAPIVAFLLP RYQFSAANKK GMPVSRDPQA LVTKYSDPLV FTGSIRVKTG YEILRIAAHL QQNLNKVKVP
401: FLVMHGTADT VTDPNASKRL YEEASSSDKS IKLFDGLLHD LLFEPEREII AGVILDWLNQ RV
001: MICSSKGTIL IARGKNSNTI PRLPLKGSST NYANRIQIRN PISVKTFRRS SSSSMAVETM SMGSDSSTLI LTSGASGRVR VLFSMRELKR LVTIIQSLIL
101: FLLLPFRVVV WRRRTGAVVI RDDKQERKVW SPPQIVVRKR NIGGESSVSP PSVPAAVVDG EVAVRRELAI KRVLEDEGGD GSSVRDYSLF TTKRGDTLFS
201: QSWSPLSPNH RGLIVLLHGL NEHSGRYSDF AKQLNANGFK VYGIDWIGHG GSDGLHAYVP SLDYAVTDLK SFLEKVFTEN PGLPCFCFGH STGGAIILKA
301: MLDPKIESRV SGIALTSPAV GVQPSHPIFA VLAPIMAFLL PRYQISAANK KGMPVSRDPA ALIAKYSDPL VFTGSIRVKT GYEILRITAH LQQNLNKVKV
401: PFLVMHGTDD TVTDPSASKK LYEEAASSDK SLKLYDGLLH DLLFEPEREI IAGAILDWLN QRV
101: FLLLPFRVVV WRRRTGAVVI RDDKQERKVW SPPQIVVRKR NIGGESSVSP PSVPAAVVDG EVAVRRELAI KRVLEDEGGD GSSVRDYSLF TTKRGDTLFS
201: QSWSPLSPNH RGLIVLLHGL NEHSGRYSDF AKQLNANGFK VYGIDWIGHG GSDGLHAYVP SLDYAVTDLK SFLEKVFTEN PGLPCFCFGH STGGAIILKA
301: MLDPKIESRV SGIALTSPAV GVQPSHPIFA VLAPIMAFLL PRYQISAANK KGMPVSRDPA ALIAKYSDPL VFTGSIRVKT GYEILRITAH LQQNLNKVKV
401: PFLVMHGTDD TVTDPSASKK LYEEAASSDK SLKLYDGLLH DLLFEPEREI IAGAILDWLN QRV
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q94AM5]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.