CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83852	Canola	plastid	93.81	96.04
AT1G18360.1	Thale cress	mitochondrion, plastid	80.41	81.68
Bra016558.1-P	Field mustard	cytosol, nucleus, plastid	73.45	72.7
CDX72991	Canola	plastid	65.98	62.9
KRH60583	Soybean	peroxisome	45.88	62.68
CDY11104	Canola	plastid	72.16	60.61
KRH39013	Soybean	cytosol, mitochondrion, peroxisome, plastid	27.32	60.57
CDX96478	Canola	plastid	55.93	59.94
CDX68225	Canola	mitochondrion	71.65	59.78
GSMUA_Achr10P...	Banana	extracellular	38.14	58.5
KRH41883	Soybean	endoplasmic reticulum, golgi	52.58	56.67
VIT_17s0000g01010.t01	Wine grape	plastid	55.67	54.0
Solyc03g098020.2.1	Tomato	plastid	56.19	53.43
PGSC0003DMT400083974	Potato	plastid	56.19	53.43
VIT_17s0000g01070.t01	Wine grape	plastid	54.9	53.38
KRH48707	Soybean	endoplasmic reticulum, golgi	51.55	52.91
TraesCS5B01G201400.1	Wheat	mitochondrion, plastid	50.77	50.51
TraesCS5A01G202900.1	Wheat	mitochondrion, plastid	50.77	50.51
TraesCS5D01G209300.2	Wheat	mitochondrion, plastid	50.77	50.26
EER98863	Sorghum	plastid	52.06	49.39
Os09t0394700-01	Rice	plastid	50.52	49.37
HORVU4Hr1G008550.3	Barley	endoplasmic reticulum, golgi	47.16	48.03
Zm00001d020380_P002	Maize	plastid	51.03	47.6
EER90977	Sorghum	endoplasmic reticulum, golgi, plastid	47.68	47.19
TraesCS4A01G263200.1	Wheat	endoplasmic reticulum, golgi	46.39	47.12
Zm00001d013406_P002	Maize	endoplasmic reticulum, golgi, mitochondrion	47.16	47.04
TraesCS4D01G051900.2	Wheat	endoplasmic reticulum, golgi	46.39	47.0
Zm00001d033797_P002	Maize	endoplasmic reticulum, golgi	47.68	46.95
Os03t0719400-01	Rice	endoplasmic reticulum, golgi	47.42	46.94
TraesCS4B01G051600.1	Wheat	endoplasmic reticulum, golgi	46.39	46.88
CDX69743	Canola	cytosol, endoplasmic reticulum, golgi, plastid	45.62	45.38
CDX97130	Canola	cytosol, endoplasmic reticulum, golgi, plastid	45.36	45.13
CDY20979	Canola	cytosol	27.32	32.92
CDY20587	Canola	cytosol	26.55	32.09
CDY72172	Canola	cytosol	12.63	31.21
CDY24963	Canola	cytosol	25.26	30.82
CDX93264	Canola	cytosol	23.97	29.25
CDY40205	Canola	cytosol	22.68	28.95
CDX73397	Canola	cytosol	22.68	28.95
CDY07008	Canola	cytosol	23.71	28.93
CDY07007	Canola	cytosol	16.75	28.63
CDY07006	Canola	cytosol	22.94	28.62
CDX79202	Canola	cytosol	12.89	27.93
CDY07651	Canola	cytosol	25.26	27.15
CDY62163	Canola	plastid	14.95	26.61
CDY69863	Canola	cytosol	22.94	26.57
CDY44908	Canola	cytosol	22.68	26.27
CDX76667	Canola	cytosol	22.16	25.44
CDY13986	Canola	cytosol	21.91	25.37
CDX92543	Canola	cytosol	22.16	25.37
CDY72184	Canola	cytosol	21.39	25.3
CDY62199	Canola	cytosol	21.39	25.3
CDX85571	Canola	plastid	20.88	24.7
CDX76116	Canola	cytosol	21.91	24.57
CDY27476	Canola	cytosol	21.91	24.5
CDY55538	Canola	cytosol	21.91	24.43
CDX95729	Canola	cytosol	21.65	24.21
CDX83323	Canola	cytosol	21.65	24.21
CDX69469	Canola	mitochondrion	22.42	24.1
CDX93957	Canola	cytosol	18.3	23.59
CDY26499	Canola	mitochondrion	21.91	22.73
CDX68059	Canola	cytosol	11.08	22.63
CDY02917	Canola	cytosol, endoplasmic reticulum, vacuole	21.39	22.55
CDX89152	Canola	mitochondrion	21.39	22.37
CDY40888	Canola	plastid	21.65	21.99
CDY40890	Canola	plastid	21.65	21.93
CDY38348	Canola	plastid	21.65	21.93
CDY11452	Canola	cytosol	19.07	19.47
CDX85514	Canola	cytosol	24.23	15.26
CDX93265	Canola	cytosol	23.45	15.09
CDY38132	Canola	mitochondrion	23.45	15.04

Protein Annotations

EnsemblPlants:CDX96722	EnsemblPlantsGene:GSBRNA2T00102937001	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:Hydrolase_4
InterPro:IPR029058	PANTHER:PTHR11614	PANTHER:PTHR11614:SF114	PFAM:PF12146	PRINTS:PR00111	ProteinID:CDX96722
ProteinID:CDX96722.1	SEG:seg	SUPFAM:SSF53474	UniParc:UPI0004EF2D29	MapMan:35.1	:

Description

BnaA08g22650D

Coordinates

chrLK031895:+:722654..725340

Molecular Weight (calculated)

42388.4 Da

IEP (calculated)

9.760

GRAVY (calculated)

-0.011

Length

388 amino acids

Sequence
(BLAST)

001: MICSSGRTIV IATGNSLPFQ ESSGDGIRIH LPINVAARRR SPMRSISSPL RKGKVCVSPR KRSIVCCISP SPTPQPTKTV VVDDEVAVRR GLAMRRVLED
101: NGGDGSSVRD FSFFTTERGD TLFTQSWTRV GSVKNRGIVV LLHGLNEHSG RYNDFAKQLN VNGFKVYGLD WIGHGGSDGL HAYVPSLDYA VTDLSSFLEK
201: VIAENPGLPC FCVGHSTGGA IILKAMLDPK IEARVSGIVL TSPAVGVQPS HPIFGVIAPF LAFLIPRYQL SAAKKKIMPV SRDPEALLAK YSDPLVYTGF
301: IRARTGYEIL RLGSHLLENL NRIKVPFLVL HGTADTVTDP KATQRLYDEA SSSDKSIKLF DGLLHDLLFE PERGIIAGVI LDWLNRRV

Best Arabidopsis Sequence Match ( AT1G18360.1 )
(BLAST)

001: MICSSKGTVV IATRSSFPRL LNRIQNRNDV PISVIATRRS SMSVEAFPMR LKSSQKKRKM NIGCGVSPSS PTTTVVDEEV AIRRKLAMRR VLEDNGGDGS
101: SVRDFSLFTT KRGDTLFTQS WTPVDSAKNR GLVVLLHGLN EHSGRYSDFA KQLNVNGFKV YGIDWIGHGG SDGLHAYVPS LDYAVADLKS FIEKVIAENP
201: GLPCFCIGHS TGGAIILKAM LDAKIEARVS GIVLTSPAVG VQPTYPIFGV IAPFLSFLIP RYQLSAAKKK IMPVSRDPEA LLAKYSDPLV YTGFIRARTG
301: NEILRLGAHL LQNLNRIKVP FLVMHGTADT VTDPKGTQKL YNEASSSDKS IKLYDGLLHD LLFEPERETI AGVILDWLNR RV

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8VYJ0]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.