CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02917	Canola	cytosol, endoplasmic reticulum, vacuole	93.93	88.32
AT3G55190.1	Thale cress	cytosol	76.01	82.45
CDY24963	Canola	cytosol	52.02	56.6
CDY40205	Canola	cytosol	49.42	56.25
CDX73397	Canola	cytosol	49.42	56.25
CDY72172	Canola	cytosol	25.43	56.05
CDY07006	Canola	cytosol	50.29	55.95
CDX93264	Canola	cytosol	50.87	55.35
CDY07008	Canola	cytosol	50.0	54.4
PGSC0003DMT400077598	Potato	cytosol	50.0	54.23
Zm00001d012434_P001	Maize	cytosol	15.32	53.54
CDY07007	Canola	cytosol	34.97	53.3
Solyc04g010250.2.1	Tomato	cytosol	48.84	52.98
EES03847	Sorghum	cytosol	45.09	50.49
CDY07651	Canola	cytosol	52.6	50.42
KRG92965	Soybean	cytosol	47.4	50.15
KRH36216	Soybean	nucleus	48.27	48.13
VIT_00s0317g00110.t01	Wine grape	cytosol	44.22	47.96
Os01t0837200-01	Rice	cytosol	16.47	47.9
Zm00001d042944_P001	Maize	cytosol	42.2	47.25
HORVU3Hr1G087040.1	Barley	cytosol	21.39	47.13
GSMUA_Achr6P34380_001	Banana	cytosol	45.95	46.09
TraesCS3A01G355100.1	Wheat	cytosol	39.31	45.48
TraesCS3B01G388000.1	Wheat	cytosol	39.31	45.48
TraesCS3D01G349000.1	Wheat	cytosol	41.91	45.45
TraesCS3D01G349100.1	Wheat	cytosol	39.02	45.15
TraesCS3A01G355000.1	Wheat	cytosol	36.71	44.88
OQU87824	Sorghum	cytosol	38.15	43.85
CDX83323	Canola	cytosol	42.49	42.36
CDX76667	Canola	cytosol	41.33	42.31
CDX95729	Canola	cytosol	41.91	41.79
CDY55538	Canola	cytosol	41.91	41.67
CDY27476	Canola	cytosol	41.62	41.5
HORVU3Hr1G086980.2	Barley	extracellular	19.94	41.07
CDX79202	Canola	cytosol	20.81	40.22
CDX93957	Canola	cytosol	34.68	39.87
CDX89152	Canola	mitochondrion	41.91	39.08
HORVU3Hr1G087020.4	Barley	mitochondrion	40.46	38.67
CDY20587	Canola	cytosol	34.97	37.69
CDY20979	Canola	cytosol	34.68	37.27
CDY11452	Canola	cytosol	38.15	34.74
CDY62163	Canola	plastid	21.1	33.49
CDY72184	Canola	cytosol	30.92	32.62
CDY62199	Canola	cytosol	30.92	32.62
CDX68059	Canola	cytosol	17.63	32.11
CDX85571	Canola	plastid	30.35	32.01
CDX69469	Canola	mitochondrion	32.95	31.58
CDY40890	Canola	plastid	33.24	30.03
CDY44908	Canola	cytosol	28.9	29.85
CDY13986	Canola	cytosol	28.9	29.85
CDY40888	Canola	plastid	32.95	29.84
CDX92543	Canola	cytosol	29.19	29.79
CDY38348	Canola	plastid	32.95	29.77
CDY69863	Canola	cytosol	28.61	29.55
CDY26499	Canola	mitochondrion	31.5	29.14
CDX93265	Canola	cytosol	50.29	28.86
CDX96478	Canola	plastid	24.28	23.2
CDX83852	Canola	plastid	24.86	22.69
CDX69743	Canola	cytosol, endoplasmic reticulum, golgi, plastid	25.43	22.56
CDX97130	Canola	cytosol, endoplasmic reticulum, golgi, plastid	25.43	22.56
CDX96722	Canola	plastid	24.57	21.91
CDX72991	Canola	plastid	24.57	20.88
CDX68225	Canola	mitochondrion	26.59	19.78
CDY11104	Canola	plastid	26.01	19.48
CDX85514	Canola	cytosol	34.39	19.32
CDY38132	Canola	mitochondrion	33.24	19.01

Protein Annotations

EnsemblPlants:CDX76116	EnsemblPlantsGene:GSBRNA2T00126391001	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:Hydrolase_4	InterPro:IPR029058
PANTHER:PTHR11614	PANTHER:PTHR11614:SF92	PFAM:PF12146	ProteinID:CDX76116	ProteinID:CDX76116.1	SUPFAM:SSF53474
UniParc:UPI0004EDDC1E	MapMan:5.7.1.1	:	:	:	:

Description

BnaA04g03800D

Coordinates

chrLK031806:-:950294..952875

Molecular Weight (calculated)

39605.0 Da

IEP (calculated)

6.439

GRAVY (calculated)

-0.249

Length

346 amino acids

Sequence
(BLAST)

001: MVLASEEKGH DYCLIQPFST FLLLRKNNNL TIYSAYIDGQ VGYSEEFIEN SRGMQLLTCK WFPVNQEPRA LIFFCHGYAI DCSTTFKDVA SKFAKEGFGV
101: YGIEYEGHGR SGGLNVYIDD FDLLINDVYS HFSKIAEMGE NPKKKKFLMG ESMGGAVVLL LHRKKPEFWE GAILIAPMCK IAEEMKPPKT VISMMNLVIH
201: LIPSWKSILP GPDIINLAIK QPHKRQEIKD NPNCYIGRPR MKTMSELFRV SLDLENRLHE VTMPFIVLHG EDDKVTDKEA SKLLYEVASS NDKTLKLYPE
301: MWHSLLFGEP LEKSEIVFND IVQWMETRIN TLQVNANNNH EAKSQI

Best Arabidopsis Sequence Match ( AT3G55190.1 )
(BLAST)

001: MAHVDGQVGY SEEFIENSRG MQLLTCKWFP VNQEPRALIF FCHGYAIDCS TTFKDIAPKF AKEGFAVHGI EYEGHGRSSG LSVYIDNFDL LIDDVSSHFS
101: KISEMGDNTK KKRFLMGESM GGAVVLLLHR KKPEFWDGGI LIAPMCKIAE EMKPSRMVIS MINMVTNLIP SWKSIIHGPD ILNSAIKLPE KRHEIRTNPN
201: CYNGWPRMKT MSELFRISLD LENRLNEVTM PFIVLHGEDD KVTDKGGSKL LYEVALSNDK TLKLYPEMWH SLLFGEPPEN SEIVFNDIVQ WMQTRITTLQ
301: VKANNHEAKT SNLITSDSV

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9M3D0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.