CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93957	Canola	cytosol	76.92	86.38
CDX89152	Canola	mitochondrion	89.64	81.67
CDX83323	Canola	cytosol	81.36	79.25
CDX95729	Canola	cytosol	81.07	78.96
CDY55538	Canola	cytosol	80.47	78.16
CDY27476	Canola	cytosol	80.18	78.1
CDY11452	Canola	cytosol	81.36	72.37
VIT_07s0005g00510.t01	Wine grape	cytosol	73.08	70.77
GSMUA_Achr8P30050_001	Banana	cytosol	68.05	70.12
Solyc09g075140.2.1	Tomato	cytosol	70.71	67.9
KRH68197	Soybean	cytosol	69.53	67.53
PGSC0003DMT400081375	Potato	cytosol	69.53	66.76
EES00668	Sorghum	cytosol	68.05	66.09
TraesCS2D01G374700.1	Wheat	cytosol	66.27	65.5
TraesCS2A01G378400.1	Wheat	cytosol	65.98	65.2
TraesCS2B01G395400.1	Wheat	cytosol	65.68	64.91
KRH69290	Soybean	cytosol	59.47	64.63
TraesCS1D01G231500.1	Wheat	peroxisome	65.09	64.33
HORVU1Hr1G058820.2	Barley	peroxisome	64.2	64.2
EES18085	Sorghum	cytosol	66.57	63.74
Zm00001d040666_P003	Maize	cytosol	65.98	63.71
Zm00001d009907_P001	Maize	cytosol	64.2	63.08
Os05t0363100-01	Rice	cytosol, nucleus, peroxisome	64.2	61.82
TraesCS1B01G243700.2	Wheat	peroxisome	64.79	58.4
TraesCS1A01G230500.1	Wheat	golgi, plastid	60.95	56.44
CDY72172	Canola	cytosol	24.56	52.87
HORVU2Hr1G090120.10	Barley	plastid	64.5	52.28
CDX93264	Canola	cytosol	49.11	52.2
CDY40205	Canola	cytosol	46.45	51.64
CDY24963	Canola	cytosol	48.52	51.57
CDX73397	Canola	cytosol	46.15	51.32
CDY07008	Canola	cytosol	47.93	50.94
CDY07006	Canola	cytosol	46.45	50.48
CDY07007	Canola	cytosol	33.73	50.22
Os01t0315600-01	Rice	cytosol, plasma membrane, plastid	22.78	48.73
CDY07651	Canola	cytosol	48.82	45.71
Os01t0315700-01	Rice	cytosol	16.86	44.53
CDX79202	Canola	cytosol	22.78	43.02
CDX76116	Canola	cytosol	42.31	41.33
CDY20587	Canola	cytosol	39.05	41.12
CDY20979	Canola	cytosol	38.76	40.68
CDY02917	Canola	cytosol, endoplasmic reticulum, vacuole	42.31	38.86
CDX69469	Canola	mitochondrion	39.35	36.84
CDY26499	Canola	mitochondrion	37.87	34.22
CDX68059	Canola	cytosol	19.23	34.21
CDX85571	Canola	plastid	31.95	32.93
CDY69863	Canola	cytosol	31.66	31.94
CDY44908	Canola	cytosol	31.66	31.94
CDY40888	Canola	plastid	35.8	31.68
CDY62163	Canola	plastid	20.41	31.65
CDY40890	Canola	plastid	35.8	31.59
CDY38348	Canola	plastid	35.8	31.59
CDY13986	Canola	cytosol	31.07	31.34
CDX92543	Canola	cytosol	31.07	30.97
CDY72184	Canola	cytosol	29.59	30.49
CDY62199	Canola	cytosol	29.59	30.49
CDX93265	Canola	cytosol	47.63	26.7
CDX97130	Canola	cytosol, endoplasmic reticulum, golgi, plastid	27.51	23.85
CDX69743	Canola	cytosol, endoplasmic reticulum, golgi, plastid	27.51	23.85
CDX96478	Canola	plastid	25.44	23.76
CDX85514	Canola	cytosol	41.72	22.89
CDY38132	Canola	mitochondrion	40.83	22.81
CDX83852	Canola	plastid	25.44	22.69
CDX72991	Canola	plastid	26.92	22.36
CDX96722	Canola	plastid	25.44	22.16
CDX68225	Canola	mitochondrion	28.11	20.43
CDY11104	Canola	plastid	27.81	20.35

Protein Annotations

EnsemblPlants:CDX76667	EnsemblPlantsGene:GSBRNA2T00127142001	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:Hydrolase_4
InterPro:IPR029058	PANTHER:PTHR11614	PANTHER:PTHR11614:SF120	PFAM:PF12146	PRINTS:PR00111	ProteinID:CDX76667
ProteinID:CDX76667.1	SEG:seg	SUPFAM:SSF53474	UniParc:UPI0004EF14E6	MapMan:5.7.1.1	:

Description

BnaC08g32530D

Coordinates

chrLK031808:-:406577..409255

Molecular Weight (calculated)

37922.8 Da

IEP (calculated)

8.192

GRAVY (calculated)

-0.294

Length

338 amino acids

Sequence
(BLAST)

001: MTKLKFDYEE EYIRNSRGVE LFACRWVPSS SSPRALIFLC HGYGMECSGF MSECGIRLAS AGYAVFGMDY EGHGRSKGAR CYIKKFGDIV NDCYDYYTSI
101: SAQEKYRGKG RFLYGESMGG AVALLLHKKD PSFWNGALLV APMCKISEKV KPHPVVINLL TRVEEIIPKW KIVPTKDVID AAFKDPVKRE EIRNNKLIYQ
201: DKPRLKTALE MLRTSMNLED TLQEITLPFF VLHGEADTVT DPEISKALFE KASTRDKTIK LYPGMWHGLT SGEPDANVDL VFADIINWLD VRTGDATSLT
301: ANVEKVACNV QGEPKREQAN LLGGLNGGGR RLVHRSSM

Best Arabidopsis Sequence Match ( AT3G62860.1 )
(BLAST)

001: MMKFKFQYEE EYIKNSRDVE LFACRWLPSS SPRALVFLCH GYGMECSSFM RECGIRLASA GYAVFGMDYE GHGRSKGARC YIKKFSNIVN DCFDYYTSIS
101: AQEEYKEKGR FLYGESMGGA VALLLHKKDP SFWNGALLVA PMCKISEKVK PHPVVINLLT RVEDIIPKWK IVPTKDVIDA AFKDPVKREE IRNNKLIYQD
201: KPRLKTALEM LRTSMDLEDT LHEITLPFFV LHGEADIVTD PEISKALFEK ASTRDKTIKL YPGMWHGLTS GEPDANVDLV FADIVNWLDA RTGDSASLTV
301: TPVHDFTSNV QKVVDGVSNG QGKSKRPQAS LLCGLNGGGR RLVHRSSM

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IZK0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.