Factsheet for PGSC0003DMT400081375

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 3
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g075140.2.1	Tomato	cytosol	95.17	95.17
VIT_07s0005g00510.t01	Wine grape	cytosol	73.3	73.93
AT3G62860.1	Thale cress	cytosol	69.32	70.11
GSMUA_Achr8P30050_001	Banana	cytosol	65.06	69.82
CDX76667	Canola	cytosol	66.76	69.53
CDX83323	Canola	cytosol	68.47	69.45
CDX95729	Canola	cytosol	68.47	69.45
Bra014388.1-P	Field mustard	cytosol	59.38	68.98
CDX93957	Canola	cytosol	58.52	68.44
CDY55538	Canola	cytosol	67.33	68.1
KRH68197	Soybean	cytosol	67.33	68.1
CDY27476	Canola	cytosol	67.05	68.01
TraesCS2D01G374700.1	Wheat	cytosol	65.62	67.54
EES00668	Sorghum	cytosol	66.76	67.53
TraesCS2A01G378400.1	Wheat	cytosol	65.34	67.25
HORVU1Hr1G058820.2	Barley	peroxisome	64.49	67.16
Zm00001d009907_P001	Maize	cytosol	65.34	66.86
Zm00001d040666_P003	Maize	cytosol	66.48	66.86
TraesCS2B01G395400.1	Wheat	cytosol	64.49	66.37
TraesCS1D01G231500.1	Wheat	peroxisome	64.49	66.37
KRH69290	Soybean	cytosol	58.24	65.92
EES18085	Sorghum	cytosol	65.91	65.72
AT2G47630.1	Thale cress	cytosol	65.34	65.53
CDX89152	Canola	mitochondrion	68.47	64.96
Os05t0363100-01	Rice	cytosol, nucleus, peroxisome	61.93	62.11
TraesCS1B01G243700.2	Wheat	peroxisome	64.49	60.53
TraesCS1A01G230500.1	Wheat	golgi, plastid	60.23	58.08
HORVU2Hr1G090120.10	Barley	plastid	63.92	53.96
Bra021437.1-P	Field mustard	cytosol	46.88	53.75
CDY11452	Canola	cytosol	57.95	53.68
Os01t0315600-01	Rice	cytosol, plasma membrane, plastid	23.86	53.16
PGSC0003DMT400077598	Potato	cytosol	47.16	52.04
PGSC0003DMT400062139	Potato	cytosol	29.83	46.26
Os01t0315700-01	Rice	cytosol	16.48	45.31
PGSC0003DMT400012910	Potato	cytosol	38.07	42.27
Bra007707.1-P	Field mustard	cytosol	63.64	39.93
PGSC0003DMT400026999	Potato	cytosol	37.5	38.6
PGSC0003DMT400067900	Potato	cytosol	37.22	38.19
PGSC0003DMT400060321	Potato	cytosol	32.95	34.63
PGSC0003DMT400014303	Potato	cytosol	30.97	33.33
PGSC0003DMT400054412	Potato	cytosol	29.26	32.29
PGSC0003DMT400037702	Potato	cytosol	34.66	30.73
Bra000456.1-P	Field mustard	nucleus	66.76	27.98
PGSC0003DMT400083974	Potato	plastid	28.69	24.75
PGSC0003DMT400011430	Potato	cytosol	26.99	23.51

Protein Annotations

EnsemblPlants:PGSC0003DMT400081375	EnsemblPlantsGene:PGSC0003DMG400031811	EntrezGene:102599748	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:Hydrolase_4
InterPro:IPR029058	PANTHER:PTHR11614	PANTHER:PTHR11614:SF120	PFAM:PF12146	PGSC:PGSC0003DMG400031811	RefSeq:XP_006359844.1
SUPFAM:SSF53474	UniParc:UPI0002949498	UniProt:M1D4N0	MapMan:5.7.1.1	:	:

Description

Esterase/lipase/thioesterase family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400031811]

Coordinates

chr9:-:52731522..52736342

Molecular Weight (calculated)

40084.5 Da

IEP (calculated)

8.318

GRAVY (calculated)

-0.345

Length

352 amino acids

Sequence
(BLAST)

001: MGVEYHEVFI RNSRGVQLFT CRWLPFSSPK ALVFLCHGYG MECSRFMRGV GTKLANNGYA VFGIDYEGHG RSVGARCYIK KFDNIVNDCS EFFKSVCAQE
101: EYREKTRFLY GESMGGAVAL LTHKKDPSFW HGALLVAPMC KISEKVKPHP MVISLLTKVE DVIPRWKIVP TKDVIDSAFK EPAKREEVRG NKLIYQAKPR
201: LKTALEMLRT SMHLEESLHE VTLPFLVLHG EADIVTDPEV SKALYEQASS KDKTIKLYPG MWHGLTYGEP EDNIEIVFSD IISWLDKRNG ESIDDASLIE
301: RSVCLATSTP PYEMHTISSP ITMKETKPQR TRPQANYLCG WKGRRMHHHS SM

Best Arabidopsis Sequence Match ( AT3G62860.1 )
(BLAST)

001: MMKFKFQYEE EYIKNSRDVE LFACRWLPSS SPRALVFLCH GYGMECSSFM RECGIRLASA GYAVFGMDYE GHGRSKGARC YIKKFSNIVN DCFDYYTSIS
101: AQEEYKEKGR FLYGESMGGA VALLLHKKDP SFWNGALLVA PMCKISEKVK PHPVVINLLT RVEDIIPKWK IVPTKDVIDA AFKDPVKREE IRNNKLIYQD
201: KPRLKTALEM LRTSMDLEDT LHEITLPFFV LHGEADIVTD PEISKALFEK ASTRDKTIKL YPGMWHGLTS GEPDANVDLV FADIVNWLDA RTGDSASLTV
301: TPVHDFTSNV QKVVDGVSNG QGKSKRPQAS LLCGLNGGGR RLVHRSSM

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IZK0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.