Factsheet for PGSC0003DMT400014303

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g119980.2.1	Tomato	cytosol	97.55	97.55
VIT_09s0002g05730.t01	Wine grape	cytosol	77.68	79.13
Bra018986.1-P	Field mustard	cytosol	79.2	78.96
CDY72184	Canola	cytosol	79.2	78.96
CDY62199	Canola	cytosol	79.2	78.96
KRH19112	Soybean	cytosol	77.06	77.3
AT1G52760.1	Thale cress	cytosol	77.68	76.51
KRH02768	Soybean	cytosol	61.77	70.38
CDY62163	Canola	plastid	46.18	69.27
Bra030364.1-P	Field mustard	plastid	46.18	69.27
GSMUA_Achr5P24890_001	Banana	cytoskeleton, cytosol, peroxisome	67.28	63.95
Os02t0207900-01	Rice	plasma membrane	61.16	58.31
GSMUA_Achr7P08420_001	Banana	cytosol	60.24	55.81
PGSC0003DMT400012910	Potato	cytosol	40.67	41.96
PGSC0003DMT400062139	Potato	cytosol	23.55	33.92
PGSC0003DMT400054412	Potato	cytosol	30.89	31.66
PGSC0003DMT400077598	Potato	cytosol	30.58	31.35
PGSC0003DMT400081375	Potato	cytosol	33.33	30.97
PGSC0003DMT400060321	Potato	cytosol	30.58	29.85
PGSC0003DMT400026999	Potato	cytosol	29.97	28.66
PGSC0003DMT400067900	Potato	cytosol	29.05	27.7
PGSC0003DMT400037702	Potato	cytosol	29.66	24.43
PGSC0003DMT400011430	Potato	cytosol	26.3	21.29
PGSC0003DMT400083974	Potato	plastid	25.38	20.34

Protein Annotations

EntrezGene:102585209	MapMan:21.6.1.3	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	GO:GO:0003674	GO:GO:0003824
GO:GO:0003846	GO:GO:0004622	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0005794	GO:GO:0005886	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150
GO:GO:0009506	GO:GO:0010043	GO:GO:0016020	GO:GO:0016740	GO:GO:0016787	GO:GO:0042542
GO:GO:0046686	GO:GO:0090430	InterPro:Hydrolase_4	InterPro:IPR029058	UniProt:M1A3Z7	PFAM:PF12146
EnsemblPlantsGene:PGSC0003DMG400005611	PGSC:PGSC0003DMG400005611	EnsemblPlants:PGSC0003DMT400014303	PANTHER:PTHR11614	PANTHER:PTHR11614:SF90	SUPFAM:SSF53474
UniParc:UPI000294CCBE	RefSeq:XP_006341666.1	:	:	:	:

Description

Esterase/lipase/thioesterase family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400005611]

Coordinates

chr3:-:59378861..59382068

Molecular Weight (calculated)

36378.3 Da

IEP (calculated)

6.511

GRAVY (calculated)

-0.286

Length

327 amino acids

Sequence
(BLAST)

001: MTSEAPETAI NYWGDMPEEE YYASQGVRNS KSHFDTPNGK LFTQSFLPLD PNVSPKATVY MTHGYGSDTG WLFQKICISY ASWGYAVFAA DLLGHGRSDG
101: IRCYVGDLEK TAATSLCFFK SVRNSDEYKH LPAFLFGESM GGLATLLMYL QSDPDTWTGL IFSAPLFVIP EPMKPSKVHL FMYGLLFGFA DTWAAMPDNK
201: MVGKAIRDPE KLKIIASNPR RYTGKPRVGT MREIARQCEY VQNNFHKVTA PFLTAHGTSD GLACPTGSKL LYEKASSEDK TLKIYDGMYH SLIQGEPDDA
301: VAIVLADMRA WIDERAERYG PKINGSA

Best Arabidopsis Sequence Match ( AT1G52760.1 )
(BLAST)

001: MPSEAESSAN SAPATPPPPP NFWGTMPEEE YYTSQGVRNS KSYFETPNGK LFTQSFLPLD GEIKGTVYMS HGYGSDTSWM FQKICMSFSS WGYAVFAADL
101: LGHGRSDGIR CYMGDMEKVA ATSLAFFKHV RCSDPYKDLP AFLFGESMGG LVTLLMYFQS EPETWTGLMF SAPLFVIPED MKPSKAHLFA YGLLFGLADT
201: WAAMPDNKMV GKAIKDPEKL KIIASNPQRY TGKPRVGTMR ELLRKTQYVQ ENFGKVTIPV FTAHGTADGV TCPTSSKLLY EKASSADKTL KIYEGMYHSL
301: IQGEPDENAE IVLKDMREWI DEKVKKYGSK TA

Arabidopsis Description

CSECaffeoylshikimate esterase [Source:UniProtKB/Swiss-Prot;Acc:Q9C942]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.