Factsheet for PGSC0003DMT400077598

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g010250.2.1	Tomato	cytosol	94.67	94.67
CDY72172	Canola	cytosol	31.97	64.97
Bra000132.1-P	Field mustard	mitochondrion	61.76	64.38
Bra017076.1-P	Field mustard	cytosol	63.95	64.35
CDY24963	Canola	cytosol	63.64	63.84
CDX93264	Canola	cytosol	63.64	63.84
AT3G55180.1	Thale cress	cytosol	62.38	63.78
AT2G39420.1	Thale cress	cytosol	63.32	63.72
Bra017077.1-P	Field mustard	cytosol	62.07	63.67
CDY07006	Canola	cytosol	62.07	63.67
AT2G39400.1	Thale cress	cytosol	62.07	63.67
CDY07008	Canola	cytosol	63.32	63.52
CDX73397	Canola	cytosol	60.5	63.49
Bra007148.1-P	Field mustard	cytosol	57.68	63.45
CDY40205	Canola	cytosol	60.19	63.16
VIT_00s0317g00110.t01	Wine grape	cytosol	60.81	60.81
AT2G39410.2	Thale cress	cytosol	59.56	59.94
KRG92965	Soybean	cytosol	59.87	58.41
CDY07007	Canola	cytosol	41.07	57.71
Zm00001d012434_P001	Maize	cytosol	17.87	57.58
CDY07651	Canola	cytosol	63.95	56.51
KRH36216	Soybean	nucleus	60.81	55.91
AT3G55190.1	Thale cress	cytosol	55.49	55.49
Os01t0837200-01	Rice	cytosol	20.69	55.46
EES03847	Sorghum	cytosol	53.6	55.34
Zm00001d042944_P001	Maize	cytosol	53.29	55.02
TraesCS3A01G355100.1	Wheat	cytosol	49.53	52.84
TraesCS3D01G349100.1	Wheat	cytosol	49.22	52.51
TraesCS3B01G388000.1	Wheat	cytosol	49.22	52.51
HORVU3Hr1G087040.1	Barley	cytosol	25.71	52.23
PGSC0003DMT400062139	Potato	cytosol	36.99	51.98
TraesCS3D01G349000.1	Wheat	cytosol	51.41	51.41
TraesCS3A01G355000.1	Wheat	cytosol	45.14	50.88
CDX76116	Canola	cytosol	54.23	50.0
GSMUA_Achr6P34380_001	Banana	cytosol	53.92	49.86
OQU87824	Sorghum	cytosol	45.45	48.17
PGSC0003DMT400081375	Potato	cytosol	52.04	47.16
CDY02917	Canola	cytosol, endoplasmic reticulum, vacuole	53.92	46.74
HORVU3Hr1G086980.2	Barley	extracellular	24.14	45.83
HORVU3Hr1G087020.4	Barley	mitochondrion	49.53	43.65
PGSC0003DMT400026999	Potato	cytosol	43.26	40.35
PGSC0003DMT400067900	Potato	cytosol	42.01	39.07
PGSC0003DMT400012910	Potato	cytosol	38.56	38.8
PGSC0003DMT400060321	Potato	cytosol	35.11	33.43
CDX93265	Canola	cytosol	60.81	32.17
KRH35942	Soybean	plastid	37.62	31.33
PGSC0003DMT400014303	Potato	cytosol	31.35	30.58
KRG90831	Soybean	plastid	37.93	30.56
PGSC0003DMT400054412	Potato	cytosol	30.09	30.09
PGSC0003DMT400037702	Potato	cytosol	36.36	29.22
PGSC0003DMT400083974	Potato	plastid	30.09	23.53
PGSC0003DMT400011430	Potato	cytosol	28.53	22.52

Protein Annotations

EnsemblPlants:PGSC0003DMT400077598	EnsemblPlantsGene:PGSC0003DMG400030181	EntrezGene:102578380	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1
InterPro:Hydrolase_4	InterPro:IPR029058	PANTHER:PTHR11614	PANTHER:PTHR11614:SF92	PFAM:PF12146	PGSC:PGSC0003DMG400030181
PRINTS:PR00111	RefSeq:XP_006361389.1	SUPFAM:SSF53474	UniParc:UPI0002954FC3	UniProt:M1CYM1	MapMan:5.7.1.1

Description

Esterase/lipase/thioesterase family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400030181]

Coordinates

chr4:+:6651610..6655774

Molecular Weight (calculated)

36564.3 Da

IEP (calculated)

6.781

GRAVY (calculated)

-0.339

Length

319 amino acids

Sequence
(BLAST)

001: MAIEYETVRY EEEFILNSRG MKLFTCNWVP KDCEPKALIF LCHGYAMECS ISMKDAGMRL AKSGFGVYGI DYEGHGKSEG LQGYVNSFDA LVDDCFDHYS
101: KISERKENKK KMRILMGESM GGAVVLLLHR KKPEFWDGAV LIAPMCKIAD DMRPPPMVIS VLTKLCYFIP TWKIVPTQDI VDSAFRDPEV RKEIRNNPHC
201: YKGKPRLQTA HQLLTVSMDL EQRLEEVTLP FFIVHGEDDT VTDPSVSKLL HEKASSIDKS FKLYPGMWHS LSYGEFPENR DIVFSDIVVW LKEKISMGNS
301: RLERQQKQAN DQILPKMSS

Best Arabidopsis Sequence Match ( AT2G39420.1 )
(BLAST)

001: MASETENIKY EESFIKNTRG MKLFTCKWVP AKQEPKALVF ICHGYAMECS ITMNSTARRL VKAGFAVYGI DYEGHGKSDG LSAYVPNFDH LVDDVSTHYT
101: SICEKEENKG KMRFLLGESM GGAVLLLLHR KKPQFWDGAV LVAPMCKIAE EMKPSPLVIS ILAKLSGVIP SWKIIPGQDI IETAFKQPEI RKQVRENPYC
201: YKGRPRLKTA YELLRVSTDL EKRLNEVSLP FIVLHGEDDK VTDKAVSRQL YEVASSSDKT FKLYPGMWHG LLYGETPENI ETVFADIIGW LDKKVADESG
301: GFESELKRKN DGIPLKG

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8RXN7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.