CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 3
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH35942	Soybean	plastid	89.14	92.17
KRH75362	Soybean	nucleus	71.46	71.83
KRH18244	Soybean	cytosol	50.0	57.39
KRG93887	Soybean	cytosol	27.02	53.77
KRH39183	Soybean	cytosol	46.97	52.54
KRH48488	Soybean	cytosol	27.27	48.43
Os01t0837200-01	Rice	cytosol	12.88	42.86
Zm00001d012434_P001	Maize	cytosol	10.35	41.41
KRG92965	Soybean	cytosol	33.08	40.06
VIT_00s0317g00110.t01	Wine grape	cytosol	31.57	39.19
TraesCS3A01G355000.1	Wheat	cytosol	27.53	38.52
EES03847	Sorghum	cytosol	30.05	38.51
KRH36216	Soybean	nucleus	33.59	38.33
HORVU3Hr1G087040.1	Barley	cytosol	15.15	38.22
PGSC0003DMT400077598	Potato	cytosol	30.56	37.93
Zm00001d042944_P001	Maize	cytosol	29.55	37.86
KRH69290	Soybean	cytosol	29.55	37.62
Solyc04g010250.2.1	Tomato	cytosol	30.05	37.3
TraesCS3A01G355100.1	Wheat	cytosol	27.53	36.45
TraesCS3B01G388000.1	Wheat	cytosol	27.53	36.45
TraesCS3D01G349100.1	Wheat	cytosol	27.53	36.45
KRH68197	Soybean	cytosol	31.82	36.21
TraesCS3D01G349000.1	Wheat	cytosol	28.54	35.42
OQU87824	Sorghum	cytosol	26.52	34.88
GSMUA_Achr6P34380_001	Banana	cytosol	29.55	33.91
KRH60583	Soybean	peroxisome	24.24	33.8
KRH20516	Soybean	cytosol	27.02	33.02
KRH39013	Soybean	cytosol, mitochondrion, peroxisome, plastid	14.39	32.57
HORVU3Hr1G086980.2	Barley	extracellular	13.64	32.14
KRH02768	Soybean	cytosol	22.73	31.36
KRH19112	Soybean	cytosol	25.51	30.98
HORVU3Hr1G087020.4	Barley	mitochondrion	28.03	30.66
KRH34878	Soybean	cytosol	25.0	30.46
KRH48707	Soybean	endoplasmic reticulum, golgi	27.78	29.1
KRH41883	Soybean	endoplasmic reticulum, golgi	26.01	28.61
KRH62086	Soybean	plastid	25.76	26.98
KRH52771	Soybean	cytosol, endoplasmic reticulum, peroxisome	24.49	26.58

Protein Annotations

EntrezGene:100819669	Gene3D:3.40.50.1820	MapMan:35.1	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	EMBL:ACUP02012646
EnsemblPlantsGene:GLYMA_20G116400	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016298	GO:GO:0016787	InterPro:Hydrolase_4	UniProt:I1NFJ7
InterPro:IPR029058	EnsemblPlants:KRG90831	ProteinID:KRG90831	ProteinID:KRG90831.1	PFAM:PF12146	PRINTS:PR00111
PANTHER:PTHR11614	PANTHER:PTHR11614:SF94	SUPFAM:SSF53474	UniParc:UPI000233DBE4	:	:

Description

hypothetical protein

Coordinates

chr20:-:35855514..35859188

Molecular Weight (calculated)

44000.2 Da

IEP (calculated)

8.371

GRAVY (calculated)

-0.143

Length

396 amino acids

Sequence
(BLAST)

001: MEPSVTLRFR SHTLSLFPHA PISSIDHPHN HLLIPISPKF SSNTTLSVAA TAKKKPSIEG VSEELNAMAS QNLDFAPSRR RVRAAFTEVH QQLDHFLFKT
101: APPGIRTEEG YERNSRGLEI FCKSWMPESG VPLKAALCFC HGYGSTCTFF FEGIAKRIAA SGYGVYAMDY PGFGLSEGLH GYIPNFDDLV DDVIEHFTKI
201: KARPEVRGLP RFILGQSMGG AIALKVHLKE QNTWDGVILV APMCKIAEGM LPPTALLRVL NLLSKVMPKA KLFPHKDLSA LTFREPGKRK VAGYNVISYD
301: HPTRLKTGME LLSATQEIES QLHKVSAPLL ILHGAADQVT DPLVSQFLYE KASSKDKTLK IYEGSYHGIL EGEPDDRIFA VHNDIISWLD FRCSLK

Best Arabidopsis Sequence Match ( AT1G77420.1 )
(BLAST)

001: MDRALTPRFD TPATLSPFRY RYGSSLAITR RFAPAIVCAK RSPIDGVSDE LNLIASQNLD QAPARRLARS AFVDLQLQLD HCLFKKAPSG IRTEEWYERN
101: SKGEDIFCKS WLPKSGDEIK AAVCFCHGYG STCTFFFDGI AKQIAGFGYG VYAIDHPGFG LSDGLHGHIP SFDDLADNAI EQFTKMKGRS ELRNLPRFLL
201: GQSMGGAVAL KIHLKEPQAW DGLILVAPMC KISEDVKPPP LVLKTLILMS TLFPKAKLFP KRDLSDFFFR DLSKRKLCEY DVICYDDQTR LKTAVELLNA
301: TRDIEMQVDK VSLPLLILHG DTDKVTDPTV SKFLHKHAVS QDKTLKLYPG GYHCILEGDT DENIFTVIND IVAWLDARVD PK

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FVW6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.