CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 3
plasma membrane 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytoskeleton, cytosol, mitochondrion, plasma membrane
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG92965	Soybean	cytosol	84.73	89.91
Bra017076.1-P	Field mustard	cytosol	60.52	66.25
CDX93264	Canola	cytosol	60.52	66.04
AT2G39420.1	Thale cress	cytosol	60.23	65.93
CDY07008	Canola	cytosol	59.94	65.41
Bra000132.1-P	Field mustard	mitochondrion	57.64	65.36
CDY24963	Canola	cytosol	59.08	64.47
Bra007148.1-P	Field mustard	cytosol	53.6	64.14
CDY40205	Canola	cytosol	55.62	63.49
CDX73397	Canola	cytosol	55.62	63.49
CDY72172	Canola	cytosol	27.95	61.78
Bra017077.1-P	Field mustard	cytosol	55.33	61.74
CDY07006	Canola	cytosol	55.33	61.74
AT2G39410.2	Thale cress	cytosol	56.2	61.51
Solyc04g010250.2.1	Tomato	cytosol	55.91	60.81
PGSC0003DMT400077598	Potato	cytosol	55.91	60.81
AT3G55180.1	Thale cress	cytosol	54.47	60.58
AT2G39400.1	Thale cress	cytosol	54.18	60.45
VIT_00s0317g00110.t01	Wine grape	cytosol	53.89	58.62
CDY07007	Canola	cytosol	38.04	58.15
CDY07651	Canola	cytosol	59.37	57.06
Zm00001d012434_P001	Maize	cytosol	15.27	53.54
AT3G55190.1	Thale cress	cytosol	48.99	53.29
EES03847	Sorghum	cytosol	46.97	52.75
TraesCS3A01G355000.1	Wheat	cytosol	42.36	51.94
TraesCS3A01G355100.1	Wheat	cytosol	43.8	50.84
TraesCS3D01G349100.1	Wheat	cytosol	43.52	50.5
TraesCS3B01G388000.1	Wheat	cytosol	43.52	50.5
Zm00001d042944_P001	Maize	cytosol	44.96	50.49
KRH69290	Soybean	cytosol	45.24	50.48
TraesCS3D01G349000.1	Wheat	cytosol	46.4	50.47
Os01t0837200-01	Rice	cytosol	17.29	50.42
HORVU3Hr1G087040.1	Barley	cytosol	22.77	50.32
CDX76116	Canola	cytosol	48.13	48.27
OQU87824	Sorghum	cytosol	41.5	47.84
KRG93887	Soybean	cytosol	27.09	47.24
GSMUA_Achr6P34380_001	Banana	cytosol	45.53	45.8
KRH68197	Soybean	cytosol	45.24	45.11
CDY02917	Canola	cytosol, endoplasmic reticulum, vacuole	47.55	44.84
HORVU3Hr1G086980.2	Barley	extracellular	20.46	42.26
HORVU3Hr1G087020.4	Barley	mitochondrion	43.8	41.99
KRH20516	Soybean	cytosol	36.89	39.51
KRH48488	Soybean	cytosol	25.36	39.46
KRH18244	Soybean	cytosol	38.62	38.84
KRH39183	Soybean	cytosol	36.31	35.59
KRH34878	Soybean	cytosol	32.56	34.77
KRG90831	Soybean	plastid	38.33	33.59
KRH75362	Soybean	nucleus	37.18	32.74
KRH35942	Soybean	plastid	36.02	32.64
CDX93265	Canola	cytosol	55.62	32.01
KRH19112	Soybean	cytosol	27.38	29.14
KRH60583	Soybean	peroxisome	23.05	28.17
KRH02768	Soybean	cytosol	22.77	27.53
KRH39013	Soybean	cytosol, mitochondrion, peroxisome, plastid	12.39	24.57
KRH41883	Soybean	endoplasmic reticulum, golgi	24.21	23.33
KRH62086	Soybean	plastid	25.36	23.28
KRH52771	Soybean	cytosol, endoplasmic reticulum, peroxisome	23.92	22.74
KRH48707	Soybean	endoplasmic reticulum, golgi	24.5	22.49

Protein Annotations

EntrezGene:100776335	Gene3D:3.40.50.1820	MapMan:5.7.1.1	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	EMBL:ACUP02006721
EnsemblPlantsGene:GLYMA_10G291400	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016298	GO:GO:0016787	InterPro:Hydrolase_4	UniProt:I1LFD8
InterPro:IPR029058	EnsemblPlants:KRH36216	ProteinID:KRH36216	ProteinID:KRH36216.1	PFAM:PF12146	PRINTS:PR00111
PANTHER:PTHR11614	PANTHER:PTHR11614:SF92	SUPFAM:SSF53474	UniParc:UPI00023CDD83	SEG:seg	:

Description

hypothetical protein

Coordinates

chr10:-:50932944..50937993

Molecular Weight (calculated)

39566.8 Da

IEP (calculated)

6.991

GRAVY (calculated)

-0.331

Length

347 amino acids

Sequence
(BLAST)

001: MATEAEFEYE EVTTNINILS YSIKFKGKEK KIKILASEAE IKYDENSRGL KLFACRWLPA NGSPKALIFL CHGYAMECSI TMKSTGTRLA KAGFAVYGID
101: YEGHGKSEGV PGLVMNFDFV IDDCSQHFTR ICEKAENKKK MRYLMGESMG GAVALLLHRK KPEYWDGAIL VAPMCKIAEE MKPNTMVISV LSALSRVFPS
201: WRIVPTPDII DLAFKVPKVR EEIRANRYCY KGNPRLRTAY ELLRVSTEIE QSLHEVSLPF IVLHGEEDQV TDKAVSKQLY DEAASSDKTL KSYPEMWHGL
301: LYGEPPQNLQ IVFSDIIGWI DQKSRYGNTR LERELKEEHE HLFKSDL

Best Arabidopsis Sequence Match ( AT2G39420.1 )
(BLAST)

001: MASETENIKY EESFIKNTRG MKLFTCKWVP AKQEPKALVF ICHGYAMECS ITMNSTARRL VKAGFAVYGI DYEGHGKSDG LSAYVPNFDH LVDDVSTHYT
101: SICEKEENKG KMRFLLGESM GGAVLLLLHR KKPQFWDGAV LVAPMCKIAE EMKPSPLVIS ILAKLSGVIP SWKIIPGQDI IETAFKQPEI RKQVRENPYC
201: YKGRPRLKTA YELLRVSTDL EKRLNEVSLP FIVLHGEDDK VTDKAVSRQL YEVASSSDKT FKLYPGMWHG LLYGETPENI ETVFADIIGW LDKKVADESG
301: GFESELKRKN DGIPLKG

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8RXN7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.