CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plastid, cytosol

Predictor Summary:

plastid 3
mitochondrion 3
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH60583	Soybean	peroxisome	77.14	47.54
KRH48707	Soybean	endoplasmic reticulum, golgi	89.71	41.53
GSMUA_Achr10P...	Banana	extracellular	56.57	39.13
KRH41883	Soybean	endoplasmic reticulum, golgi	76.0	36.94
CDX96478	Canola	plastid	62.86	30.39
VIT_17s0000g01010.t01	Wine grape	plastid	67.43	29.5
Bra003843.1-P	Field mustard	golgi, vacuole	64.0	29.32
VIT_17s0000g01070.t01	Wine grape	plastid	64.0	28.07
CDX83852	Canola	plastid	60.57	27.97
PGSC0003DMT400083974	Potato	plastid	65.14	27.94
Solyc03g098020.2.1	Tomato	plastid	64.57	27.7
KRH52771	Soybean	cytosol, endoplasmic reticulum, peroxisome	57.14	27.4
CDX96722	Canola	plastid	60.57	27.32
Bra015989.1-P	Field mustard	plastid	63.43	27.27
CDX72991	Canola	plastid	63.43	27.27
AT1G18360.1	Thale cress	mitochondrion, plastid	59.43	27.23
KRH62086	Soybean	plastid	57.14	26.45
TraesCS5B01G201400.1	Wheat	mitochondrion, plastid	58.29	26.15
TraesCS5A01G202900.1	Wheat	mitochondrion, plastid	58.29	26.15
TraesCS5D01G209300.2	Wheat	mitochondrion, plastid	58.29	26.02
Bra016558.1-P	Field mustard	cytosol, nucleus, plastid	57.71	25.77
Os03t0719400-01	Rice	endoplasmic reticulum, golgi	56.57	25.26
KRG93887	Soybean	cytosol	28.57	25.13
HORVU4Hr1G008550.3	Barley	endoplasmic reticulum, golgi	54.29	24.93
Os09t0394700-01	Rice	plastid	56.0	24.69
TraesCS4A01G263200.1	Wheat	endoplasmic reticulum, golgi	53.71	24.61
TraesCS4D01G051900.2	Wheat	endoplasmic reticulum, golgi	53.71	24.54
TraesCS4B01G051600.1	Wheat	endoplasmic reticulum, golgi	53.71	24.48
CDY11104	Canola	plastid	64.57	24.46
EER98863	Sorghum	plastid	57.14	24.45
AT1G73480.1	Thale cress	mitochondrion, plastid	64.57	24.41
CDX68225	Canola	mitochondrion	64.0	24.09
Zm00001d020380_P002	Maize	plastid	57.14	24.04
Zm00001d033797_P002	Maize	endoplasmic reticulum, golgi	53.71	23.86
Zm00001d013406_P002	Maize	endoplasmic reticulum, golgi, mitochondrion	52.57	23.65
EER90977	Sorghum	endoplasmic reticulum, golgi, plastid	52.57	23.47
KRH48488	Soybean	cytosol	26.86	21.08
KRH20516	Soybean	cytosol	32.57	17.59
KRH68197	Soybean	cytosol	30.29	15.23
KRH69290	Soybean	cytosol	26.86	15.11
KRH18244	Soybean	cytosol	29.71	15.07
KRH19112	Soybean	cytosol	28.0	15.03
KRG90831	Soybean	plastid	32.57	14.39
KRH35942	Soybean	plastid	31.43	14.36
KRH39183	Soybean	cytosol	27.43	13.56
KRG92965	Soybean	cytosol	25.14	13.46
KRH75362	Soybean	nucleus	30.29	13.45
KRH34878	Soybean	cytosol	24.57	13.23
KRH02768	Soybean	cytosol	21.14	12.89
KRH36216	Soybean	nucleus	24.57	12.39

Protein Annotations

Gene3D:3.40.50.1820	MapMan:35.2	InterPro:AB_hydrolase	EMBL:ACUP02005905	EnsemblPlantsGene:GLYMA_09G171800	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020
GO:GO:0016298	GO:GO:0016787	InterPro:Hydrolase_4	UniProt:I1L419	InterPro:IPR029058	EnsemblPlants:KRH39013
ProteinID:KRH39013	ProteinID:KRH39013.1	PFAM:PF12146	PANTHER:PTHR11614	PANTHER:PTHR11614:SF114	SUPFAM:SSF53474
UniParc:UPI00023C94F1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:39653605..39654996

Molecular Weight (calculated)

19180.3 Da

IEP (calculated)

8.627

GRAVY (calculated)

-0.014

Length

175 amino acids

Sequence
(BLAST)

001: MRRRRGIGKV FLEKILNENH GLPCFCHGHS TGAAITLKAL LDPKVVASIV GATFTSPAVG VEPSHPILVA LAPIVSFLLP TYQCNSAYKK GLPVSRDPDA
101: LIAKYSDPLV CTGSLRVLLH ADSVTDPDAS QKLYEQASST DKTIKLYEGF AHDLLFEPKR EDITRNIIQW LNSRI

Best Arabidopsis Sequence Match ( AT1G18360.1 )
(BLAST)

001: MICSSKGTVV IATRSSFPRL LNRIQNRNDV PISVIATRRS SMSVEAFPMR LKSSQKKRKM NIGCGVSPSS PTTTVVDEEV AIRRKLAMRR VLEDNGGDGS
101: SVRDFSLFTT KRGDTLFTQS WTPVDSAKNR GLVVLLHGLN EHSGRYSDFA KQLNVNGFKV YGIDWIGHGG SDGLHAYVPS LDYAVADLKS FIEKVIAENP
201: GLPCFCIGHS TGGAIILKAM LDAKIEARVS GIVLTSPAVG VQPTYPIFGV IAPFLSFLIP RYQLSAAKKK IMPVSRDPEA LLAKYSDPLV YTGFIRARTG
301: NEILRLGAHL LQNLNRIKVP FLVMHGTADT VTDPKGTQKL YNEASSSDKS IKLYDGLLHD LLFEPERETI AGVILDWLNR RV

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8VYJ0]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.