Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 6
  • mitochondrion 3
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX96722 Canola plastid 96.04 93.81
AT1G18360.1 Thale cress mitochondrion, plastid 82.06 81.41
Bra016558.1-P Field mustard cytosol, nucleus, plastid 75.2 72.7
CDX72991 Canola plastid 67.55 62.9
KRH60583 Soybean peroxisome 46.7 62.32
KRH39013 Soybean cytosol, mitochondrion, peroxisome, plastid 27.97 60.57
CDY11104 Canola plastid 73.09 59.96
CDX96478 Canola plastid 57.26 59.94
CDX68225 Canola mitochondrion 72.3 58.92
GSMUA_Achr10P... Banana extracellular 38.79 58.1
KRH41883 Soybean endoplasmic reticulum, golgi 53.56 56.39
VIT_17s0000g01010.t01 Wine grape plastid 56.99 54.0
VIT_17s0000g01070.t01 Wine grape plastid 55.94 53.13
Solyc03g098020.2.1 Tomato plastid 56.99 52.94
PGSC0003DMT400083974 Potato plastid 56.99 52.94
KRH48707 Soybean endoplasmic reticulum, golgi 52.51 52.65
TraesCS5B01G201400.1 Wheat mitochondrion, plastid 51.98 50.51
TraesCS5A01G202900.1 Wheat mitochondrion, plastid 51.98 50.51
TraesCS5D01G209300.2 Wheat mitochondrion, plastid 51.98 50.26
EER98863 Sorghum plastid 53.3 49.39
Os09t0394700-01 Rice plastid 51.72 49.37
Zm00001d020380_P002 Maize plastid 52.24 47.6
HORVU4Hr1G008550.3 Barley endoplasmic reticulum, golgi 47.76 47.51
Os03t0719400-01 Rice endoplasmic reticulum, golgi 48.28 46.68
EER90977 Sorghum endoplasmic reticulum, golgi, plastid 48.28 46.68
TraesCS4A01G263200.1 Wheat endoplasmic reticulum, golgi 46.97 46.6
Zm00001d013406_P002 Maize endoplasmic reticulum, golgi, mitochondrion 47.76 46.53
TraesCS4D01G051900.2 Wheat endoplasmic reticulum, golgi 46.97 46.48
Zm00001d033797_P002 Maize endoplasmic reticulum, golgi 48.28 46.45
TraesCS4B01G051600.1 Wheat endoplasmic reticulum, golgi 46.97 46.35
CDX69743 Canola cytosol, endoplasmic reticulum, golgi, plastid 46.7 45.38
CDX97130 Canola cytosol, endoplasmic reticulum, golgi, plastid 46.44 45.13
CDY20979 Canola cytosol 27.7 32.61
CDY20587 Canola cytosol 26.91 31.78
CDY72172 Canola cytosol 12.93 31.21
CDY24963 Canola cytosol 25.86 30.82
CDY40205 Canola cytosol 23.48 29.28
CDX73397 Canola cytosol 23.48 29.28
CDX93264 Canola cytosol 24.54 29.25
CDY07008 Canola cytosol 24.27 28.93
CDY07007 Canola cytosol 17.15 28.63
CDY07006 Canola cytosol 23.48 28.62
CDX79202 Canola cytosol 13.19 27.93
CDY07651 Canola cytosol 25.86 27.15
CDY69863 Canola cytosol 23.75 26.87
CDY62163 Canola plastid 15.3 26.61
CDY44908 Canola cytosol 23.48 26.57
CDY13986 Canola cytosol 22.69 25.67
CDX92543 Canola cytosol 22.96 25.66
CDX76667 Canola cytosol 22.69 25.44
CDY62199 Canola cytosol 21.9 25.3
CDY72184 Canola cytosol 21.9 25.3
CDX85571 Canola plastid 21.64 25.0
CDX76116 Canola cytosol 22.69 24.86
CDY27476 Canola cytosol 22.43 24.5
CDY55538 Canola cytosol 22.43 24.43
CDX95729 Canola cytosol 22.16 24.21
CDX83323 Canola cytosol 22.16 24.21
CDX69469 Canola mitochondrion 22.96 24.1
CDX93957 Canola cytosol 18.73 23.59
CDY02917 Canola cytosol, endoplasmic reticulum, vacuole 22.16 22.83
CDX68059 Canola cytosol 11.35 22.63
CDY40888 Canola plastid 22.69 22.51
CDY26499 Canola mitochondrion 22.16 22.46
CDX89152 Canola mitochondrion 21.9 22.37
CDY38348 Canola plastid 22.43 22.19
CDY40890 Canola plastid 22.43 22.19
CDY11452 Canola cytosol 19.53 19.47
CDX85514 Canola cytosol 24.8 15.26
CDX93265 Canola cytosol 24.01 15.09
CDY38132 Canola mitochondrion 24.01 15.04
Protein Annotations
EnsemblPlants:CDX83852EnsemblPlantsGene:GSBRNA2T00139612001Gene3D:3.40.50.1820InterPro:AB_hydrolaseInterPro:Hydrolase_4InterPro:IPR029058
PANTHER:PTHR11614PANTHER:PTHR11614:SF114PFAM:PF12146ProteinID:CDX83852ProteinID:CDX83852.1SEG:seg
SUPFAM:SSF53474UniParc:UPI0004EE2120MapMan:35.1:::
Description
BnaC08g17930D
Coordinates
chrLK031834:+:791018..794107
Molecular Weight (calculated)
41512.2 Da
IEP (calculated)
9.637
GRAVY (calculated)
-0.033
Length
379 amino acids
Sequence
(BLAST)
001: MICSSGRTIV LATGISLPFN VDGTRNHHPI NATARRRSPM RSISSPLVKQ RKRNVVCCIS PSPTPQPTKT VVVDDEVAVR RGLAMRRVLE DNGGDGSSVR
101: DFSFFTTERG DTLFTQSWTR VGSVKNRGIV VLLHGLNEHS GRYNDFAKQL NVNGFKVYGI DWIGHGGSDG LHAYVPSLDY AVTDLSSFLE KVIAENPGLP
201: CFCVGHSTGG AIILKAMLDP KIEAQVSGIV LTSPAVGVQP SHPIFGVIAP FLAFLIPRYQ LSAAKKKIMP VSRDPEALLA KYSDPLVYTG FIRARTGYEI
301: LRLGSHLLEN LNRIKVPFLV LHGTADTVTD PKATQRLYDE ASSSDKSIKL FDGLLHDLLF EPERGIIAGV ILDWLNRRV
Best Arabidopsis Sequence Match ( AT1G18360.1 )
(BLAST)
001: MICSSKGTVV IATRSSFPRL LNRIQNRNDV PISVIATRRS SMSVEAFPMR LKSSQKKRKM NIGCGVSPSS PTTTVVDEEV AIRRKLAMRR VLEDNGGDGS
101: SVRDFSLFTT KRGDTLFTQS WTPVDSAKNR GLVVLLHGLN EHSGRYSDFA KQLNVNGFKV YGIDWIGHGG SDGLHAYVPS LDYAVADLKS FIEKVIAENP
201: GLPCFCIGHS TGGAIILKAM LDAKIEARVS GIVLTSPAVG VQPTYPIFGV IAPFLSFLIP RYQLSAAKKK IMPVSRDPEA LLAKYSDPLV YTGFIRARTG
301: NEILRLGAHL LQNLNRIKVP FLVMHGTADT VTDPKGTQKL YNEASSSDKS IKLYDGLLHD LLFEPERETI AGVILDWLNR RV
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8VYJ0]
SUBAcon: [plastid,mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.