CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra014388.1-P	Field mustard	cytosol	79.25	97.03
CDX93957	Canola	cytosol	77.9	96.01
AT3G62860.1	Thale cress	cytosol	84.37	89.94
CDX76667	Canola	cytosol	81.67	89.64
CDX95729	Canola	cytosol	77.63	83.0
CDX83323	Canola	cytosol	77.63	83.0
CDY55538	Canola	cytosol	75.74	80.75
CDY27476	Canola	cytosol	74.93	80.12
VIT_07s0005g00510.t01	Wine grape	cytosol	68.46	72.78
Solyc09g075140.2.1	Tomato	cytosol	66.31	69.89
GSMUA_Achr8P30050_001	Banana	cytosol	61.73	69.82
PGSC0003DMT400081375	Potato	cytosol	64.96	68.47
KRH68197	Soybean	cytosol	63.88	68.1
EES00668	Sorghum	cytosol	62.26	66.38
CDY11452	Canola	cytosol	67.92	66.32
KRH69290	Soybean	cytosol	54.45	64.95
TraesCS2B01G395400.1	Wheat	cytosol	59.57	64.62
TraesCS2D01G374700.1	Wheat	cytosol	59.57	64.62
TraesCS2A01G378400.1	Wheat	cytosol	59.3	64.33
Zm00001d040666_P003	Maize	cytosol	60.38	64.0
TraesCS1D01G231500.1	Wheat	peroxisome	58.76	63.74
EES18085	Sorghum	cytosol	60.65	63.74
Zm00001d009907_P001	Maize	cytosol	58.76	63.37
HORVU1Hr1G058820.2	Barley	peroxisome	57.68	63.31
Os05t0363100-01	Rice	cytosol, nucleus, peroxisome	57.68	60.97
TraesCS1B01G243700.2	Wheat	peroxisome	58.49	57.87
TraesCS1A01G230500.1	Wheat	golgi, plastid	54.99	55.89
CDX93264	Canola	cytosol	45.28	52.83
HORVU2Hr1G090120.10	Barley	plastid	59.03	52.52
CDY40205	Canola	cytosol	42.86	52.3
CDX73397	Canola	cytosol	42.59	51.97
CDY72172	Canola	cytosol	21.83	51.59
CDY07007	Canola	cytosol	31.27	51.1
CDY07008	Canola	cytosol	43.67	50.94
CDY24963	Canola	cytosol	43.67	50.94
CDY07006	Canola	cytosol	42.05	50.16
Os01t0315600-01	Rice	cytosol, plasma membrane, plastid	20.75	48.73
CDY07651	Canola	cytosol	44.47	45.71
Os01t0315700-01	Rice	cytosol	15.09	43.75
CDX79202	Canola	cytosol	20.75	43.02
CDX76116	Canola	cytosol	39.08	41.91
CDY20587	Canola	cytosol	35.04	40.5
CDY20979	Canola	cytosol	34.5	39.75
CDY02917	Canola	cytosol, endoplasmic reticulum, vacuole	39.35	39.67
CDX69469	Canola	mitochondrion	36.12	37.12
CDY26499	Canola	mitochondrion	35.04	34.76
CDX68059	Canola	cytosol	17.52	34.21
CDX85571	Canola	plastid	28.57	32.32
CDY69863	Canola	cytosol	28.3	31.34
CDY44908	Canola	cytosol	28.3	31.34
CDY62163	Canola	plastid	18.33	31.19
CDY62199	Canola	cytosol	27.49	31.1
CDY72184	Canola	cytosol	27.49	31.1
CDY13986	Canola	cytosol	28.03	31.04
CDX92543	Canola	cytosol	28.03	30.68
CDY40888	Canola	plastid	31.54	30.63
CDY40890	Canola	plastid	31.54	30.55
CDY38348	Canola	plastid	31.54	30.55
CDX93265	Canola	cytosol	43.13	26.53
CDY38132	Canola	mitochondrion	37.2	22.81
CDX85514	Canola	cytosol	37.74	22.73
CDX96478	Canola	plastid	21.83	22.38
CDX97130	Canola	cytosol, endoplasmic reticulum, golgi, plastid	23.45	22.31
CDX69743	Canola	cytosol, endoplasmic reticulum, golgi, plastid	23.45	22.31
CDX83852	Canola	plastid	22.37	21.9
CDX96722	Canola	plastid	22.37	21.39
CDX72991	Canola	plastid	23.18	21.13
CDX68225	Canola	mitochondrion	24.26	19.35
CDY11104	Canola	plastid	23.99	19.26

Protein Annotations

EnsemblPlants:CDX89152	EnsemblPlantsGene:GSBRNA2T00149303001	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:Hydrolase_4
InterPro:IPR029058	PANTHER:PTHR11614	PANTHER:PTHR11614:SF120	PFAM:PF12146	PRINTS:PR00111	ProteinID:CDX89152
ProteinID:CDX89152.1	SEG:seg	SUPFAM:SSF53474	UniParc:UPI0004EE5F1E	MapMan:5.7.1.1	:

Description

BnaA04g00340D

Coordinates

chrLK031857:-:1431296..1434618

Molecular Weight (calculated)

42023.8 Da

IEP (calculated)

8.892

GRAVY (calculated)

-0.356

Length

371 amino acids

Sequence
(BLAST)

001: MSFNSLRNIG KNRNKKKYHQ YLLMKFKFDY QEECIRNSRD VELFACRWVP STSPPKALIF LCHGYGMECS GFMRECGIRL ASAGYAVFGM DYEGHGRSQG
101: ARCYIKKFSN IVNDCYDYYT SISAQEEYKE KGRFLYGESM GGAVALLLHK KDPSFWNGAL LVAPMCKISE KAKPHPVVIN LLTRVEEIIP KWKIVPTKDV
201: IDAAFKDPVK REEIRNNKLI YQDKPRLKTA LEMLRTSMNL EDSLHEITLP FIVLHGEADI LTDPEISKAL FEKASSRDKT IKLYPGMWHG LTSGEPDANV
301: DLVFADIITW LDDRTADSAS LTVTPVRDVT ANVRKVVEGA CNDQGKPKRQ YASLLCGLNG GGRRLVHRSS M

Best Arabidopsis Sequence Match ( AT3G62860.1 )
(BLAST)

001: MMKFKFQYEE EYIKNSRDVE LFACRWLPSS SPRALVFLCH GYGMECSSFM RECGIRLASA GYAVFGMDYE GHGRSKGARC YIKKFSNIVN DCFDYYTSIS
101: AQEEYKEKGR FLYGESMGGA VALLLHKKDP SFWNGALLVA PMCKISEKVK PHPVVINLLT RVEDIIPKWK IVPTKDVIDA AFKDPVKREE IRNNKLIYQD
201: KPRLKTALEM LRTSMDLEDT LHEITLPFFV LHGEADIVTD PEISKALFEK ASTRDKTIKL YPGMWHGLTS GEPDANVDLV FADIVNWLDA RTGDSASLTV
301: TPVHDFTSNV QKVVDGVSNG QGKSKRPQAS LLCGLNGGGR RLVHRSSM

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IZK0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.