CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40890	Canola	plastid	98.69	98.43
CDY38348	Canola	plastid	98.17	97.91
Bra008307.1-P	Field mustard	cytosol, plastid	97.38	97.38
CDX79202	Canola	cytosol	40.31	86.03
AT1G77420.1	Thale cress	cytosol	85.86	85.86
CDX68059	Canola	cytosol	34.82	70.0
KRH75362	Soybean	nucleus	62.04	60.15
VIT_01s0011g03620.t01	Wine grape	cytosol, plastid	64.92	59.47
Solyc05g009390.2.1	Tomato	plastid	60.99	58.69
PGSC0003DMT400037702	Potato	cytosol	60.99	58.69
GSMUA_Achr3P29490_001	Banana	plastid	57.33	57.94
TraesCS3D01G263200.2	Wheat	mitochondrion	56.28	57.18
TraesCS3A01G263400.1	Wheat	mitochondrion, plastid	56.28	57.18
TraesCS3B01G296600.2	Wheat	plastid	55.76	56.65
HORVU3Hr1G063840.1	Barley	mitochondrion, plastid	55.76	56.65
Os01t0688200-01	Rice	plastid	57.07	56.48
GSMUA_Achr4P03690_001	Banana	mitochondrion	55.5	55.5
KXG33155	Sorghum	plastid	53.4	55.43
Zm00001d011619_P002	Maize	plastid	55.76	53.12
CDX69469	Canola	mitochondrion	47.38	50.14
CDY26499	Canola	mitochondrion	46.07	47.06
CDX93264	Canola	cytosol	32.98	39.62
CDY24963	Canola	cytosol	32.72	39.31
CDY72172	Canola	cytosol	15.97	38.85
CDY07008	Canola	cytosol	32.2	38.68
CDY07007	Canola	cytosol	22.51	37.89
CDY20587	Canola	cytosol	30.89	36.76
CDY20979	Canola	cytosol	30.37	36.02
CDX73397	Canola	cytosol	28.53	35.86
CDY40205	Canola	cytosol	28.53	35.86
CDX76667	Canola	cytosol	31.68	35.8
CDY07006	Canola	cytosol	28.8	35.37
CDY07651	Canola	cytosol	32.98	34.9
CDX95729	Canola	cytosol	31.68	34.87
CDX83323	Canola	cytosol	31.68	34.87
CDY27476	Canola	cytosol	31.15	34.29
CDY55538	Canola	cytosol	31.15	34.2
CDX93957	Canola	cytosol	26.7	33.89
CDX76116	Canola	cytosol	29.84	32.95
CDX89152	Canola	mitochondrion	30.63	31.54
CDY62199	Canola	cytosol	26.96	31.4
CDY72184	Canola	cytosol	26.96	31.4
CDY13986	Canola	cytosol	27.23	31.04
CDY02917	Canola	cytosol, endoplasmic reticulum, vacuole	29.84	30.98
CDX85514	Canola	cytosol	49.21	30.52
CDX85571	Canola	plastid	26.18	30.49
CDY44908	Canola	cytosol	26.7	30.45
CDX92543	Canola	cytosol	26.96	30.38
CDY69863	Canola	cytosol	26.44	30.15
CDY38132	Canola	mitochondrion	47.38	29.92
CDY62163	Canola	plastid	16.49	28.9
CDY11452	Canola	cytosol	27.75	27.89
CDX97130	Canola	cytosol, endoplasmic reticulum, golgi, plastid	25.13	24.62
CDX69743	Canola	cytosol, endoplasmic reticulum, golgi, plastid	25.13	24.62
CDX96478	Canola	plastid	22.51	23.76
CDX83852	Canola	plastid	22.51	22.69
CDX72991	Canola	plastid	24.08	22.6
CDX68225	Canola	mitochondrion	26.44	21.72
CDX96722	Canola	plastid	21.99	21.65
CDY11104	Canola	plastid	25.92	21.43
CDX93265	Canola	cytosol	29.58	18.74

Protein Annotations

EnsemblPlants:CDY40888	EnsemblPlantsGene:GSBRNA2T00071921001	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:Hydrolase_4
InterPro:IPR029058	PANTHER:PTHR11614	PANTHER:PTHR11614:SF94	PFAM:PF12146	PRINTS:PR00111	ProteinID:CDY40888
ProteinID:CDY40888.1	SUPFAM:SSF53474	UniParc:UPI0004EEB0B6	UniProt:A0A078HVS4	MapMan:35.1	:

Description

BnaCnng09790DBnaCnng09790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HVS4]

Coordinates

chrLK032483:+:243633..245643

Molecular Weight (calculated)

42672.7 Da

IEP (calculated)

7.476

GRAVY (calculated)

-0.137

Length

382 amino acids

Sequence
(BLAST)

001: MDLALTSRFN IPSTLSPYYH SRTSLAAITR RITPAIVCAK RSPIEGVSEE LNLIASEELD QAPARRRVRS AFVDLQLQLD HCLFKKAPVG IRTEEWYERN
101: SKGEEIFCKC WLPEAGVKIK AAVCFCHGYG STCTFLFDGI AKQIAGSGYG VYAIDHPGFG LSDGLHGHIP SFDDLADNAI QQFTKMKGRP ELRNVPRFLF
201: GQSMGGAIAL KVHLKEPQAW DGLILVAPMC KISEDVKPPK LVLNALILMS TLFPKAKLFP KKDMSELFFR DPSKRKLSDY DVICYDDQTR LKTAVELLNA
301: TRDIEMQVDK VSLPLLILHG AADRVTDPNV SKFLHEQAIS QDKTLKLYPG GYHCILEGDT DENIFTVIND IVAWLDARTT PK

Best Arabidopsis Sequence Match ( AT1G77420.1 )
(BLAST)

001: MDRALTPRFD TPATLSPFRY RYGSSLAITR RFAPAIVCAK RSPIDGVSDE LNLIASQNLD QAPARRLARS AFVDLQLQLD HCLFKKAPSG IRTEEWYERN
101: SKGEDIFCKS WLPKSGDEIK AAVCFCHGYG STCTFFFDGI AKQIAGFGYG VYAIDHPGFG LSDGLHGHIP SFDDLADNAI EQFTKMKGRS ELRNLPRFLL
201: GQSMGGAVAL KIHLKEPQAW DGLILVAPMC KISEDVKPPP LVLKTLILMS TLFPKAKLFP KRDLSDFFFR DLSKRKLCEY DVICYDDQTR LKTAVELLNA
301: TRDIEMQVDK VSLPLLILHG DTDKVTDPTV SKFLHKHAVS QDKTLKLYPG GYHCILEGDT DENIFTVIND IVAWLDARVD PK

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FVW6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.