CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92543	Canola	cytosol	96.42	95.28
CDY44908	Canola	cytosol	91.04	91.04
CDY69863	Canola	cytosol	90.15	90.15
AT5G19290.1	Thale cress	cytoskeleton, cytosol, plastid	86.87	88.18
KRH34878	Soybean	cytosol	71.34	73.54
CDX85571	Canola	plastid	70.45	71.95
VIT_13s0019g04260.t01	Wine grape	cytosol	67.76	69.0
GSMUA_Achr1P08950_001	Banana	peroxisome	66.57	67.37
PGSC0003DMT400060321	Potato	cytosol	67.16	67.16
Solyc05g056000.2.1	Tomato	cytosol	67.16	67.16
Zm00001d040681_P001	Maize	cytosol, mitochondrion	61.79	63.11
TraesCS4B01G051000.1	Wheat	cytosol	60.6	62.27
TraesCS4D01G051100.1	Wheat	cytosol, golgi	60.3	62.15
Os01t0317800-01	Rice	plasma membrane	60.9	62.01
TraesCS4A01G263500.1	Wheat	cytosol	60.0	61.85
EES00674	Sorghum	cytosol	60.3	61.21
CDY20587	Canola	cytosol	37.61	39.25
CDY20979	Canola	cytosol	37.01	38.51
CDY24963	Canola	cytosol	33.13	34.91
CDY07007	Canola	cytosol	23.58	34.8
CDX93264	Canola	cytosol	32.24	33.96
CDY07008	Canola	cytosol	31.34	33.02
CDY40205	Canola	cytosol	29.55	32.57
CDX73397	Canola	cytosol	29.55	32.57
CDY72172	Canola	cytosol	15.22	32.48
CDX79202	Canola	cytosol	17.31	32.4
CDY07006	Canola	cytosol	29.25	31.51
CDX76667	Canola	cytosol	31.34	31.07
CDY07651	Canola	cytosol	33.43	31.02
CDY62163	Canola	plastid	19.7	30.28
CDX95729	Canola	cytosol	31.04	29.97
CDX83323	Canola	cytosol	31.04	29.97
CDX93957	Canola	cytosol	26.87	29.9
CDY27476	Canola	cytosol	30.45	29.39
CDY55538	Canola	cytosol	30.15	29.02
CDY62199	Canola	cytosol	28.36	28.96
CDY72184	Canola	cytosol	28.36	28.96
CDX76116	Canola	cytosol	29.85	28.9
CDX89152	Canola	mitochondrion	31.04	28.03
CDY02917	Canola	cytosol, endoplasmic reticulum, vacuole	30.15	27.45
CDY38348	Canola	plastid	31.34	27.42
CDY40888	Canola	plastid	31.04	27.23
CDY40890	Canola	plastid	31.04	27.15
CDX68059	Canola	cytosol	14.93	26.32
CDX69469	Canola	mitochondrion	27.46	25.48
CDY26499	Canola	mitochondrion	27.16	24.33
CDX83852	Canola	plastid	25.67	22.69
CDX96478	Canola	plastid	24.48	22.65
CDY11452	Canola	cytosol	25.67	22.63
CDX96722	Canola	plastid	25.37	21.91
CDX72991	Canola	plastid	26.27	21.62
CDX97130	Canola	cytosol, endoplasmic reticulum, golgi, plastid	23.58	20.26
CDX69743	Canola	cytosol, endoplasmic reticulum, golgi, plastid	23.58	20.26
CDY11104	Canola	plastid	25.67	18.61
CDX68225	Canola	mitochondrion	25.67	18.49
CDX93265	Canola	cytosol	31.94	17.74
CDY38132	Canola	mitochondrion	28.96	16.03
CDX85514	Canola	cytosol	28.66	15.58

Protein Annotations

EnsemblPlants:CDY13986	EnsemblPlantsGene:GSBRNA2T00078497001	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:Hydrolase_4	InterPro:IPR029058
PANTHER:PTHR11614	PANTHER:PTHR11614:SF101	PFAM:PF12146	ProteinID:CDY13986	ProteinID:CDY13986.1	SEG:seg
SUPFAM:SSF53474	UniParc:UPI0001B638A3	UniProt:A0A078FLK9	MapMan:35.1	:	:

Description

BnaC09g38400DBnaC09g38400D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FLK9]

Coordinates

chrLK032039:+:667203..668313

Molecular Weight (calculated)

37337.7 Da

IEP (calculated)

6.581

GRAVY (calculated)

-0.109

Length

335 amino acids

Sequence
(BLAST)

001: MVLHPIADAD ENNPFGSLSA DEFYAKHSVT QSSAFITNPR GLKIFTQWWS PLPPARPIGI VAVVHGFTGE SSWFLQLTSI LFAKSGYITC AIDHQGHGFS
101: DGLVAHIPDI NPVVDDCISF FDDFRNRNRQ ETHNLPCFLY SESLGGAIAL YISLRQRGVW DGLILNGAMC GISAKFKPPW PLEHLLFVVA NLIPTWRVIP
201: TRGSIPDVSF KEPWKRKLAI ASPRRTVARP RAATAYELIR VCNELQGRFE EVEVPLLIVH GGGDVVCDQA CVEELHRRAS SEDKTIKIYP GMWHQMVGES
301: EEDVDLVYGD ILTWLKTRSE TAAERKRELR AGGGA

Best Arabidopsis Sequence Match ( AT5G19290.1 )
(BLAST)

001: MGLHPISDAN EHNPFGSLTA DEFYAKHSVS HSSAFITNPR GLKLFTQWWS PLPPTKPIGI IAVVHGFTGE SSWFLQLTSI LFAKSGFITC AIDHQGHGFS
101: DGLIAHIPDI NPVVDDCISF FDDFRSRQTP SDLPCFLYSE SLGGAIALYI SLRQRGVWDG LILNGAMCGI SDKFKPPWPL EHLLFVVANL IPTWRVIPTR
201: GSIPDVSFKE PWKRKLAMAS PRRTVAKPRA ATAYELIRVC KDLQGRFEEV EVPLLIVHGG GDVVCDVACV EELHRRAISE DKTIKIYPEL WHQMIGESEE
301: KVDLVYGDML SWLKSRAERK ARAAVDGGAA

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8VZV6]
SUBAcon: [plastid,cytoskeleton,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.