CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra017076.1-P	Field mustard	cytosol	98.74	99.05
CDX93264	Canola	cytosol	96.86	96.86
CDY24963	Canola	cytosol	90.57	90.57
AT2G39420.1	Thale cress	cytosol	87.74	88.01
CDY07651	Canola	cytosol	90.25	79.5
CDY72172	Canola	cytosol	37.74	76.43
CDY07007	Canola	cytosol	53.46	74.89
CDY07006	Canola	cytosol	69.5	71.06
CDY40205	Canola	cytosol	67.92	71.05
CDX73397	Canola	cytosol	67.92	71.05
KRG92965	Soybean	cytosol	65.72	63.91
PGSC0003DMT400077598	Potato	cytosol	63.52	63.32
Solyc04g010250.2.1	Tomato	cytosol	62.89	62.7
VIT_00s0317g00110.t01	Wine grape	cytosol	60.38	60.19
KRH36216	Soybean	nucleus	65.41	59.94
Os01t0837200-01	Rice	cytosol	21.7	57.98
HORVU3Hr1G087040.1	Barley	cytosol	27.99	56.69
EES03847	Sorghum	cytosol	54.4	55.99
Zm00001d012434_P001	Maize	cytosol	17.3	55.56
Zm00001d042944_P001	Maize	cytosol	53.46	55.02
TraesCS3A01G355000.1	Wheat	cytosol	48.74	54.77
TraesCS3D01G349000.1	Wheat	cytosol	53.46	53.29
TraesCS3A01G355100.1	Wheat	cytosol	49.37	52.51
TraesCS3B01G388000.1	Wheat	cytosol	49.06	52.17
TraesCS3D01G349100.1	Wheat	cytosol	49.06	52.17
CDX76116	Canola	cytosol	54.4	50.0
OQU87824	Sorghum	cytosol	46.54	49.17
GSMUA_Achr6P34380_001	Banana	cytosol	53.14	48.99
CDX76667	Canola	cytosol	50.94	47.93
CDY02917	Canola	cytosol, endoplasmic reticulum, vacuole	54.4	47.01
CDX83323	Canola	cytosol	51.26	46.97
CDX95729	Canola	cytosol	50.94	46.69
CDY27476	Canola	cytosol	50.63	46.4
CDY55538	Canola	cytosol	50.63	46.26
HORVU3Hr1G086980.2	Barley	extracellular	23.9	45.24
CDX93957	Canola	cytosol	42.77	45.18
CDX89152	Canola	mitochondrion	50.94	43.67
CDX79202	Canola	cytosol	24.53	43.58
HORVU3Hr1G087020.4	Barley	mitochondrion	49.06	43.09
CDY20587	Canola	cytosol	42.45	42.06
CDY20979	Canola	cytosol	42.14	41.61
CDX93265	Canola	cytosol	73.58	38.81
CDY11452	Canola	cytosol	45.28	37.89
CDX69469	Canola	mitochondrion	40.88	36.01
CDX68059	Canola	cytosol	20.75	34.74
CDY26499	Canola	mitochondrion	39.31	33.42
CDX85571	Canola	plastid	34.28	33.23
CDY69863	Canola	cytosol	34.28	32.54
CDY44908	Canola	cytosol	33.96	32.24
CDY40888	Canola	plastid	38.68	32.2
CDY40890	Canola	plastid	38.68	32.11
CDY38348	Canola	plastid	38.68	32.11
CDY72184	Canola	cytosol	32.7	31.71
CDY62199	Canola	cytosol	32.7	31.71
CDY13986	Canola	cytosol	33.02	31.34
CDX92543	Canola	cytosol	32.7	30.68
CDY62163	Canola	plastid	20.44	29.82
CDX69743	Canola	cytosol, endoplasmic reticulum, golgi, plastid	31.76	25.9
CDX97130	Canola	cytosol, endoplasmic reticulum, golgi, plastid	31.45	25.64
CDX83852	Canola	plastid	28.93	24.27
CDX96478	Canola	plastid	27.04	23.76
CDX96722	Canola	plastid	28.93	23.71
CDX72991	Canola	plastid	29.25	22.85
CDY38132	Canola	mitochondrion	41.51	21.82
CDX85514	Canola	cytosol	42.14	21.75
CDX68225	Canola	mitochondrion	30.82	21.08
CDY11104	Canola	plastid	30.5	21.0

Protein Annotations

EnsemblPlants:CDY07008	EnsemblPlantsGene:GSBRNA2T00123321001	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:Hydrolase_4
InterPro:IPR029058	PANTHER:PTHR11614	PANTHER:PTHR11614:SF92	PFAM:PF12146	PRINTS:PR00111	ProteinID:CDY07008
ProteinID:CDY07008.1	SUPFAM:SSF53474	UniParc:UPI0004EE5342	MapMan:5.7.1.1	:	:

Description

BnaA04g23070D

Coordinates

chrLK031974:+:654214..656904

Molecular Weight (calculated)

36003.3 Da

IEP (calculated)

6.408

GRAVY (calculated)

-0.395

Length

318 amino acids

Sequence
(BLAST)

001: MQASETENIK YEESFIKNTR GMKLFTCKWL PANKEPKSLI FICHGYAMEC SITMNSTARR LVNAGYGVYG MDYEGHGKSD GLSAYVPNFD HLVDDVSAHY
101: TSICEREENK CKMRYLLGES MGGAVLLLLH RKKPEFWDGA VLVAPMCKIA EEMKPNPVVI SVLSKLSGVI PTWKIIPGQD IIETAFKQPE VRKQVRENPY
201: CYKGRPRLKT ANELLRISTD LEKRLDEVSL PFMVLHGEDD KVTDKAVSGQ FYEVASSSDK TFKLYPGMWH GLLYGETPEN IEIVFTDIIG WLDKRASDGN
301: GGFESELKRK EDGFTLKE

Best Arabidopsis Sequence Match ( AT2G39420.1 )
(BLAST)

001: MASETENIKY EESFIKNTRG MKLFTCKWVP AKQEPKALVF ICHGYAMECS ITMNSTARRL VKAGFAVYGI DYEGHGKSDG LSAYVPNFDH LVDDVSTHYT
101: SICEKEENKG KMRFLLGESM GGAVLLLLHR KKPQFWDGAV LVAPMCKIAE EMKPSPLVIS ILAKLSGVIP SWKIIPGQDI IETAFKQPEI RKQVRENPYC
201: YKGRPRLKTA YELLRVSTDL EKRLNEVSLP FIVLHGEDDK VTDKAVSRQL YEVASSSDKT FKLYPGMWHG LLYGETPENI ETVFADIIGW LDKKVADESG
301: GFESELKRKN DGIPLKG

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8RXN7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.