CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra000132.1-P	Field mustard	mitochondrion	84.21	99.35
CDY24963	Canola	cytosol	86.15	97.8
AT2G39420.1	Thale cress	cytosol	80.06	91.17
CDY07008	Canola	cytosol	79.5	90.25
CDX93264	Canola	cytosol	79.22	89.94
CDY72172	Canola	cytosol	34.9	80.25
CDY07007	Canola	cytosol	48.48	77.09
CDY07006	Canola	cytosol	62.88	72.99
CDX73397	Canola	cytosol	60.94	72.37
CDY40205	Canola	cytosol	60.94	72.37
PGSC0003DMT400077598	Potato	cytosol	56.51	63.95
Solyc04g010250.2.1	Tomato	cytosol	56.23	63.64
KRG92965	Soybean	cytosol	56.51	62.39
VIT_00s0317g00110.t01	Wine grape	cytosol	53.74	60.81
Os01t0837200-01	Rice	cytosol	19.94	60.5
Zm00001d012434_P001	Maize	cytosol	16.34	59.6
KRH36216	Soybean	nucleus	57.06	59.37
EES03847	Sorghum	cytosol	49.86	58.25
HORVU3Hr1G087040.1	Barley	cytosol	24.93	57.32
Zm00001d042944_P001	Maize	cytosol	48.2	56.31
TraesCS3A01G355000.1	Wheat	cytosol	43.49	55.48
TraesCS3A01G355100.1	Wheat	cytosol	45.15	54.52
TraesCS3D01G349100.1	Wheat	cytosol	44.88	54.18
TraesCS3B01G388000.1	Wheat	cytosol	44.88	54.18
TraesCS3D01G349000.1	Wheat	cytosol	47.65	53.92
CDX76116	Canola	cytosol	50.42	52.6
GSMUA_Achr6P34380_001	Banana	cytosol	49.31	51.59
OQU87824	Sorghum	cytosol	42.94	51.49
CDY02917	Canola	cytosol, endoplasmic reticulum, vacuole	50.14	49.18
CDX76667	Canola	cytosol	45.71	48.82
CDX83323	Canola	cytosol	46.26	48.13
CDX95729	Canola	cytosol	45.98	47.84
CDY27476	Canola	cytosol	45.43	47.26
CDY55538	Canola	cytosol	45.43	47.13
HORVU3Hr1G087020.4	Barley	mitochondrion	45.98	45.86
CDX93957	Canola	cytosol	38.23	45.85
HORVU3Hr1G086980.2	Barley	extracellular	21.33	45.83
CDX79202	Canola	cytosol	22.44	45.25
CDY20587	Canola	cytosol	39.61	44.55
CDX89152	Canola	mitochondrion	45.71	44.47
CDY20979	Canola	cytosol	39.34	44.1
CDX93265	Canola	cytosol	67.59	40.46
CDY11452	Canola	cytosol	40.17	38.16
CDX69469	Canola	mitochondrion	37.95	37.95
CDX68059	Canola	cytosol	19.39	36.84
CDY26499	Canola	mitochondrion	36.84	35.56
CDX85571	Canola	plastid	31.58	34.76
CDY69863	Canola	cytosol	32.13	34.63
CDY44908	Canola	cytosol	31.86	34.33
CDY13986	Canola	cytosol	31.02	33.43
CDY40888	Canola	plastid	34.9	32.98
CDY40890	Canola	plastid	34.9	32.9
CDY38348	Canola	plastid	34.9	32.9
CDX92543	Canola	cytosol	30.75	32.74
CDY72184	Canola	cytosol	29.36	32.32
CDY62199	Canola	cytosol	29.36	32.32
CDY62163	Canola	plastid	18.01	29.82
CDX69743	Canola	cytosol, endoplasmic reticulum, golgi, plastid	28.25	26.15
CDX97130	Canola	cytosol, endoplasmic reticulum, golgi, plastid	27.98	25.9
CDX83852	Canola	plastid	27.15	25.86
CDX96722	Canola	plastid	27.15	25.26
CDX96478	Canola	plastid	25.21	25.14
CDX72991	Canola	plastid	26.87	23.83
CDX85514	Canola	cytosol	39.61	23.21
CDY38132	Canola	mitochondrion	38.78	23.14
CDX68225	Canola	mitochondrion	28.25	21.94
CDY11104	Canola	plastid	27.98	21.86

Protein Annotations

EnsemblPlants:CDY07651	EnsemblPlantsGene:GSBRNA2T00124760001	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:Hydrolase_4
InterPro:IPR029058	PANTHER:PTHR11614	PANTHER:PTHR11614:SF92	PFAM:PF12146	PRINTS:PR00111	ProteinID:CDY07651
ProteinID:CDY07651.1	SUPFAM:SSF53474	UniParc:UPI0004EF0D39	UniProt:A0A078F2Q3	MapMan:5.7.1.1	:

Description

BnaA03g18600DBnaA03g18600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F2Q3]

Coordinates

chrLK031980:-:304871..308130

Molecular Weight (calculated)

41217.8 Da

IEP (calculated)

7.548

GRAVY (calculated)

-0.366

Length

361 amino acids

Sequence
(BLAST)

001: MTFFFVKKQT KRVGVRGEER DPLFRHYQTK TASHCETWIN LFLKMASETD NIMYEESFIK NTRGMKLFTC KWLPASQEPK ALIFICHGYA MECSITMNST
101: ARRLVKAGFG VYGMDYEGHG KSDGLGAYIP NFDHLVDDVS AHYTSICERE ENKGKMRFLL GESMGGAVLL LLHRKKPEFW DGAVLVAPMC KIAEEMKPSP
201: LVISILSKLS GVIPTWKIIP GQDIIETAFK QPEIRKQVRE NPYCYKGRPR LKTAYELLRV STDLEKRLNE VSLPFLVLHG EDDKVTDKAV SRELYETASS
301: SDKTFKLYPG MWHGLLYGET PENIEIVFAD IIGWLDKRAS DGHGGFESEL KRENDAFQLK E

Best Arabidopsis Sequence Match ( AT2G39420.1 )
(BLAST)

001: MASETENIKY EESFIKNTRG MKLFTCKWVP AKQEPKALVF ICHGYAMECS ITMNSTARRL VKAGFAVYGI DYEGHGKSDG LSAYVPNFDH LVDDVSTHYT
101: SICEKEENKG KMRFLLGESM GGAVLLLLHR KKPQFWDGAV LVAPMCKIAE EMKPSPLVIS ILAKLSGVIP SWKIIPGQDI IETAFKQPEI RKQVRENPYC
201: YKGRPRLKTA YELLRVSTDL EKRLNEVSLP FIVLHGEDDK VTDKAVSRQL YEVASSSDKT FKLYPGMWHG LLYGETPENI ETVFADIIGW LDKKVADESG
301: GFESELKRKN DGIPLKG

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8RXN7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.