CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69469	Canola	mitochondrion	90.37	93.63
AT5G16120.4	Thale cress	mitochondrion	77.54	75.72
PGSC0003DMT400062139	Potato	cytosol	42.25	69.6
KRG93887	Soybean	cytosol	36.9	69.35
KRH18244	Soybean	cytosol	60.16	65.22
Solyc02g063160.2.1	Tomato	cytosol	59.63	65.2
PGSC0003DMT400026999	Potato	cytosol	57.75	63.16
GSMUA_AchrUn_...	Banana	cytosol	56.15	61.22
VIT_14s0006g02900.t01	Wine grape	plastid	61.23	59.48
PGSC0003DMT400067900	Potato	cytosol	53.21	58.02
Os10t0135600-01	Rice	plastid	55.88	56.64
TraesCS5B01G291500.2	Wheat	plastid	56.42	56.57
Solyc02g086040.1.1	Tomato	cytosol	42.51	56.38
TraesCS5A01G292100.1	Wheat	plastid	56.15	56.3
TraesCS5D01G299500.3	Wheat	plastid	56.15	56.3
GSMUA_Achr9P21380_001	Banana	cytosol	51.07	55.85
HORVU5Hr1G077350.3	Barley	plastid	55.88	55.73
OQU91987	Sorghum	cytosol	55.08	53.93
Zm00001d030256_P004	Maize	plastid	55.88	50.48
CDY38132	Canola	mitochondrion	80.21	49.59
CDX79202	Canola	cytosol	23.26	48.6
CDX85514	Canola	cytosol	79.68	48.38
Solyc02g063200.1.1	Tomato	cytosol	43.85	47.26
CDY40888	Canola	plastid	47.06	46.07
CDY38348	Canola	plastid	47.06	45.95
CDY40890	Canola	plastid	47.06	45.95
CDY24963	Canola	cytosol	34.76	40.88
CDX93264	Canola	cytosol	34.22	40.25
CDY72172	Canola	cytosol	16.84	40.13
CDY07006	Canola	cytosol	32.89	39.55
CDY07008	Canola	cytosol	33.42	39.31
CDY40205	Canola	cytosol	31.82	39.14
CDX73397	Canola	cytosol	31.82	39.14
CDX68059	Canola	cytosol	19.79	38.95
CDX83323	Canola	cytosol	35.56	38.33
CDX95729	Canola	cytosol	35.56	38.33
CDY07007	Canola	cytosol	22.99	37.89
CDX76667	Canola	cytosol	34.22	37.87
CDY20587	Canola	cytosol	32.35	37.69
CDY20979	Canola	cytosol	32.35	37.58
CDX93957	Canola	cytosol	29.95	37.21
CDY07651	Canola	cytosol	35.56	36.84
CDY55538	Canola	cytosol	34.22	36.78
CDY27476	Canola	cytosol	33.69	36.31
CDX89152	Canola	mitochondrion	34.76	35.04
CDX76116	Canola	cytosol	29.14	31.5
CDY11452	Canola	cytosol	31.28	30.79
CDY02917	Canola	cytosol, endoplasmic reticulum, vacuole	28.88	29.35
CDX85571	Canola	plastid	24.6	28.05
CDY72184	Canola	cytosol	24.6	28.05
CDY62199	Canola	cytosol	24.6	28.05
CDY13986	Canola	cytosol	24.33	27.16
CDY69863	Canola	cytosol	24.06	26.87
CDX92543	Canola	cytosol	24.33	26.84
CDY44908	Canola	cytosol	23.8	26.57
CDY62163	Canola	plastid	15.24	26.15
CDX69743	Canola	cytosol, endoplasmic reticulum, golgi, plastid	24.33	23.33
CDX97130	Canola	cytosol, endoplasmic reticulum, golgi, plastid	24.33	23.33
CDX96478	Canola	plastid	21.66	22.38
CDX83852	Canola	plastid	22.46	22.16
CDX96722	Canola	plastid	22.73	21.91
CDX72991	Canola	plastid	23.53	21.62
CDX68225	Canola	mitochondrion	25.94	20.86
CDY11104	Canola	plastid	25.4	20.56
CDX93265	Canola	cytosol	32.89	20.4

Protein Annotations

EnsemblPlants:CDY26499	EnsemblPlantsGene:GSBRNA2T00035315001	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:Hydrolase_4
InterPro:IPR029058	PANTHER:PTHR11614	PANTHER:PTHR11614:SF86	PFAM:PF12146	PRINTS:PR00111	ProteinID:CDY26499
ProteinID:CDY26499.1	SUPFAM:SSF53474	UniParc:UPI0004EE47C8	UniProt:A0A078GMQ3	MapMan:35.1	:

Description

BnaC09g41690DBnaC09g41690D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GMQ3]

Coordinates

chrLK032190:+:509021..514340

Molecular Weight (calculated)

42125.9 Da

IEP (calculated)

7.619

GRAVY (calculated)

-0.177

Length

374 amino acids

Sequence
(BLAST)

001: MALSSAKLFL FSPLHGRHLS SVYRQGNWPV WQRKSSMAEL DNEELRRLKD VNMDEAPARR HVRDCFKDIQ HNLDHILIKT PGDGIKTKES YEVNSRGVEI
101: FSKSWLPEAS RPRALVCFCH GIARRLSLSG YGVFAMDYPG FGLSEGLHGY ISSFDLLVED VIEHFSNIKE NSEFSSLPSF LFGQSMGGAV SLKIHFKQPN
201: AWTGAVLVAP MCKIAEDMVP PPVLKHILIG LSSVLPKHKL VPQKDLTDAA FRDVTKRKLA PYNVICYCDK PRLRTAVEML RTTQEIEQQL HKVCLPILIL
301: HGEADRMTDP SVSRELYEKA KSSDKKIVLY KDAFQAISIA VSSHVSCEPD EVILRVLSDI ISWLDDHSLQ VEGS

Best Arabidopsis Sequence Match ( AT5G16120.4 )
(BLAST)

001: MALRSATKLT LFSPLHGFVD KGRRSLWQRR KSMAPTATLD NNEELRRLRE VNIDEAPGRR RVRDSLKDIQ LNLDHILFKT PENGIKTKES FEVNSRGVEI
101: FSKSWLPEAS KPRALVCFCH GYGDTCTFFF EGIARRLALS GYGVFAMDYP GFGLSEGLHG YIPSFDLLVQ DVIEHYSNIK ANPEFSSLPS FLFGQSMGGA
201: VSLKIHLKQP NAWAGAVLLA PMCKIADDLV PPPVLKQILI GLANVLPKHK LVPQKDLAEA GFRDIRKRDM TPYNMICYSG KPRLRTAVEM LRTTQDIEKQ
301: LQEVSLPILI LHGEADTVTD PSVSRELYEK AKSPDKKIVL YENAYHSLLE GEPDDMILRV LSDIISWLND HSLQAEGSSV TTM

Arabidopsis Description

alpha/beta-Hydrolases superfamily protein [Source:TAIR;Acc:AT5G16120]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.