Factsheet for TraesCS5D01G299500.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G291500.2	Wheat	plastid	99.2	99.2
TraesCS5A01G292100.1	Wheat	plastid	99.2	99.2
HORVU5Hr1G077350.3	Barley	plastid	96.78	96.27
Os10t0135600-01	Rice	plastid	87.13	88.08
OQU91987	Sorghum	cytosol	82.84	80.89
GSMUA_AchrUn_...	Banana	cytosol	69.44	75.51
Zm00001d030256_P004	Maize	plastid	82.57	74.4
PGSC0003DMT400062139	Potato	cytosol	43.16	70.93
Solyc02g063160.2.1	Tomato	cytosol	61.66	67.25
PGSC0003DMT400026999	Potato	cytosol	59.52	64.91
Bra008644.1-P	Field mustard	cytosol	56.57	63.75
PGSC0003DMT400067900	Potato	cytosol	56.84	61.81
Solyc02g086040.1.1	Tomato	cytosol	45.58	60.28
KRH39183	Soybean	cytosol	56.84	59.89
VIT_14s0006g02900.t01	Wine grape	plastid	61.39	59.48
CDX69469	Canola	mitochondrion	56.84	58.73
KRH48488	Soybean	cytosol	34.85	58.3
AT5G16120.4	Thale cress	mitochondrion	59.52	57.96
CDY26499	Canola	mitochondrion	56.3	56.15
TraesCS3D01G263200.2	Wheat	mitochondrion	52.28	51.86
Solyc02g063200.1.1	Tomato	cytosol	45.58	48.99
TraesCS1D01G231500.1	Wheat	peroxisome	37.8	41.23
TraesCS5D01G163000.1	Wheat	cytosol	32.44	40.47
TraesCS2D01G374700.1	Wheat	cytosol	37.0	40.35
Bra023553.1-P	Field mustard	cytosol	58.71	39.53
TraesCS4D01G133100.1	Wheat	cytosol	32.98	39.3
TraesCS5D01G163100.1	Wheat	cytosol	35.12	39.1
CDX85514	Canola	cytosol	60.59	36.69
CDY38132	Canola	mitochondrion	59.25	36.53
TraesCS2D01G208700.1	Wheat	cytosol	30.56	34.55
TraesCS3D01G349100.1	Wheat	cytosol	27.35	34.11
TraesCS3D01G349000.1	Wheat	cytosol	28.95	33.86
TraesCS4D01G051100.1	Wheat	cytosol, golgi	25.47	29.23
TraesCS3D01G142300.1	Wheat	cytosol	25.47	24.42
TraesCS4D01G051900.2	Wheat	endoplasmic reticulum, golgi	24.93	24.28
TraesCS5D01G209300.2	Wheat	mitochondrion, plastid	24.4	23.21

Protein Annotations

EnsemblPlants:TraesCS5D01G299500.3	EnsemblPlantsGene:TraesCS5D01G299500	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:Hydrolase_4
InterPro:IPR029058	PANTHER:PTHR11614	PANTHER:PTHR11614:SF94	PFAM:PF12146	PRINTS:PR00111	SEG:seg
SUPFAM:SSF53474	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr5D:+:397009424..397014172

Molecular Weight (calculated)

41730.2 Da

IEP (calculated)

6.512

GRAVY (calculated)

-0.245

Length

373 amino acids

Sequence
(BLAST)

001: MPHVNAKVSA VAATGMSAVP AAAAPPSPRR WEGVDPALER MVLRACLDQA PERRRVREAF KDVQLSIDHC LFKAQYSDIG TKESYERNSR GVEIFSKCWF
101: PENHRMKAIV CLCHGYGDTC TFFLDGIARK IASAGYGVFA LDYPGFGLSE GLHGYIPSFD TLVDDVAEHF AKIKGNPEYR DLPSFLFGQS MGGAVALKIH
201: FKQPKDWNGA ILVAPMCKIS DDVVPAWPVQ QVLIFMAKLL PKEKLVPQKD LAELAFREKE KQEQCSYNVI AYKDKPRLRT ALEMLRTTQE IESRLQEVSL
301: PIIILHGEAD LVTDPGVSKD LYEKAKTSDK TLRLYKDGYH AILEGEPDEG IFKVLDDIIS WLDQHSAKEI PSS

Best Arabidopsis Sequence Match ( AT5G16120.1 )
(BLAST)

001: MAPTATLDNN EELRRLREVN IDEAPGRRRV RDSLKDIQLN LDHILFKTPE NGIKTKESFE VNSRGVEIFS KSWLPEASKP RALVCFCHGY GDTCTFFFEG
101: IARRLALSGY GVFAMDYPGF GLSEGLHGYI PSFDLLVQDV IEHYSNIKAN PEFSSLPSFL FGQSMGGAVS LKIHLKQPNA WAGAVLLAPM CKIADDLVPP
201: PVLKQILIGL ANVLPKHKLV PQKDLAEAGF RDIRKRDMTP YNMICYSGKP RLRTAVEMLR TTQDIEKQLQ EVSLPILILH GEADTVTDPS VSRELYEKAK
301: SPDKKIVLYE NAYHSLLEGE PDDMILRVLS DIISWLNDHS LQAEGSSVTT M

Arabidopsis Description

alpha/beta-Hydrolases superfamily protein [Source:TAIR;Acc:AT5G16120]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.