Factsheet for VIT_14s0006g02900.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
peroxisome 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, peroxisome, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400062139	Potato	cytosol	45.71	77.53
Solyc02g063160.2.1	Tomato	cytosol	68.05	76.61
KRH18244	Soybean	cytosol	67.53	75.36
PGSC0003DMT400026999	Potato	cytosol	66.23	74.56
KRG93887	Soybean	cytosol	38.44	74.37
PGSC0003DMT400067900	Potato	cytosol	63.12	70.85
GSMUA_AchrUn_...	Banana	cytosol	62.08	69.68
Bra008644.1-P	Field mustard	cytosol	59.22	68.88
Solyc02g086040.1.1	Tomato	cytosol	48.57	66.31
CDX69469	Canola	mitochondrion	60.52	64.54
AT5G16120.4	Thale cress	mitochondrion	63.9	64.23
GSMUA_Achr9P21380_001	Banana	cytosol	56.1	63.16
Os10t0135600-01	Rice	plastid	60.0	62.6
TraesCS5A01G292100.1	Wheat	plastid	59.74	61.66
OQU91987	Sorghum	cytosol	61.04	61.52
TraesCS5D01G299500.3	Wheat	plastid	59.48	61.39
TraesCS5B01G291500.2	Wheat	plastid	59.48	61.39
CDY26499	Canola	mitochondrion	59.48	61.23
HORVU5Hr1G077350.3	Barley	plastid	59.22	60.8
Zm00001d030256_P004	Maize	plastid	62.34	57.97
Solyc02g063200.1.1	Tomato	cytosol	49.35	54.76
VIT_01s0011g03620.t01	Wine grape	cytosol, plastid	54.03	49.88
Bra023553.1-P	Field mustard	cytosol	60.52	42.06
VIT_10s0116g00730.t01	Wine grape	cytosol	33.25	40.76
CDX85514	Canola	cytosol	65.19	40.75
CDY38132	Canola	mitochondrion	62.6	39.83
VIT_07s0005g00510.t01	Wine grape	cytosol	35.06	38.68
VIT_00s0317g00110.t01	Wine grape	cytosol	31.17	37.62
VIT_09s0002g05730.t01	Wine grape	cytosol	27.01	32.4
VIT_13s0019g04260.t01	Wine grape	cytosol	27.53	32.22
VIT_10s0003g04950.t01	Wine grape	cytosol	25.45	29.88
VIT_17s0000g01010.t01	Wine grape	plastid	26.75	25.75
VIT_17s0000g01070.t01	Wine grape	plastid	25.97	25.06
VIT_04s0008g03220.t01	Wine grape	cytosol	24.68	23.81

Protein Annotations

EntrezGene:100261782	wikigene:100261782	Gene3D:3.40.50.1820	MapMan:35.1	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1
ProteinID:CCB57713	ProteinID:CCB57713.1	UniProt:F6HSS2	EMBL:FN596245	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016298
GO:GO:0016787	InterPro:Hydrolase_4	InterPro:IPR029058	EntrezGene:LOC100261782	wikigene:LOC100261782	PFAM:PF12146
PRINTS:PR00111	PANTHER:PTHR11614	PANTHER:PTHR11614:SF86	SUPFAM:SSF53474	UniParc:UPI0002108890	ArrayExpress:VIT_14s0006g02900
EnsemblPlantsGene:VIT_14s0006g02900	EnsemblPlants:VIT_14s0006g02900.t01	RefSeq:XP_002280343	RefSeq:XP_002280343.2	SEG:seg	:

Description

No Description!

Coordinates

chr14:-:21104190..21113920

Molecular Weight (calculated)

43439.9 Da

IEP (calculated)

9.222

GRAVY (calculated)

-0.257

Length

385 amino acids

Sequence
(BLAST)

001: MTSTHMSSQS PKFSPRHPVA DFRDRVCFPR KGRKRREPMA PAAKLEGVDK ELQKILDAKM DEAPARRRAR EAFKEIQLGI DHLLFKTPPD GVKMEEMYVV
101: NSRGLEIFSK SWLPANSPPK AVICFCHGYG DTCTFFVEGI ARKLAVSGYG FFAMDYPGFG LSDGLHAYIP SFDVLVDDVM EHYSKVKANP EFRTLPSFLF
201: GESMGGAVLL KVHLKQPNAW TGAVLVAPMC KIADDMVPPK LLKQFLICIA HFLPKKKLVP QNDLAEMAFR DSKKRRLAAY NVIAYKDKPR LRTAVELLRT
301: TQEIERRLKE VALPLLILHG EADTVTDPSV SKALYEKASS SDKKLNLYKD AYHALLEGEP DEMIIRIFDD IISWLDGHST KTTHI

Best Arabidopsis Sequence Match ( AT5G16120.4 )
(BLAST)

001: MALRSATKLT LFSPLHGFVD KGRRSLWQRR KSMAPTATLD NNEELRRLRE VNIDEAPGRR RVRDSLKDIQ LNLDHILFKT PENGIKTKES FEVNSRGVEI
101: FSKSWLPEAS KPRALVCFCH GYGDTCTFFF EGIARRLALS GYGVFAMDYP GFGLSEGLHG YIPSFDLLVQ DVIEHYSNIK ANPEFSSLPS FLFGQSMGGA
201: VSLKIHLKQP NAWAGAVLLA PMCKIADDLV PPPVLKQILI GLANVLPKHK LVPQKDLAEA GFRDIRKRDM TPYNMICYSG KPRLRTAVEM LRTTQDIEKQ
301: LQEVSLPILI LHGEADTVTD PSVSRELYEK AKSPDKKIVL YENAYHSLLE GEPDDMILRV LSDIISWLND HSLQAEGSSV TTM

Arabidopsis Description

alpha/beta-Hydrolases superfamily protein [Source:TAIR;Acc:AT5G16120]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.