Factsheet for VIT_10s0003g04950.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g069930.1.1	Tomato	cytosol	67.07	68.97
PGSC0003DMT400054412	Potato	cytosol	66.46	68.34
GSMUA_Achr10P...	Banana	cytosol	53.05	59.59
VIT_13s0019g04260.t01	Wine grape	cytosol	53.05	52.89
VIT_10s0116g00730.t01	Wine grape	cytosol	36.28	37.9
VIT_09s0002g05730.t01	Wine grape	cytosol	32.32	33.02
VIT_00s0317g00110.t01	Wine grape	cytosol	32.01	32.92
VIT_07s0005g00510.t01	Wine grape	cytosol	33.84	31.81
VIT_14s0006g02900.t01	Wine grape	plastid	29.88	25.45
VIT_01s0011g03620.t01	Wine grape	cytosol, plastid	27.74	21.82
VIT_17s0000g01070.t01	Wine grape	plastid	23.78	19.55
VIT_17s0000g01010.t01	Wine grape	plastid	22.87	18.75
VIT_04s0008g03220.t01	Wine grape	cytosol	20.73	17.04

Protein Annotations

EntrezGene:100245598	wikigene:100245598	Gene3D:3.40.50.1820	MapMan:35.1	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1
EMBL:AM464331	ProteinID:CAN63634	ProteinID:CAN63634.1	ProteinID:CCB55855	ProteinID:CCB55855.1	UniProt:F6HLY0
EMBL:FN595992	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016298	GO:GO:0016787	InterPro:Hydrolase_4	InterPro:IPR029058
EntrezGene:LOC100245598	wikigene:LOC100245598	PFAM:PF12146	PRINTS:PR00111	PANTHER:PTHR11614	PANTHER:PTHR11614:SF107
SUPFAM:SSF53474	UniParc:UPI0001984192	ArrayExpress:VIT_10s0003g04950	EnsemblPlantsGene:VIT_10s0003g04950	EnsemblPlants:VIT_10s0003g04950.t01	RefSeq:XP_002263371
RefSeq:XP_002263371.1	:	:	:	:	:

Description

No Description!

Coordinates

chr10:-:8834139..8835312

Molecular Weight (calculated)

36615.3 Da

IEP (calculated)

8.221

GRAVY (calculated)

-0.138

Length

328 amino acids

Sequence
(BLAST)

001: MAHPVHQANE NSPFGNLTRE EFYKKHHVLH QEGFMLNSQN LKIFTQSWCP DSTLQPKGLV AMVHGYTSES SWLFGLTAVA IAKAGFLVYA LDLQGHGYSE
101: GLPGHIPDIQ PIVRDCIQYF DSARANHPKL PAFLYGESLG GAIAILLCLK QECKWNGLIL NGAMCGVSAK FKPVWPLEKL LPVAAFFAPN WRIVISKPLA
201: SKSYKEEWKR KLVAKSPNRR ASGKPPAATA LEFLRVCDYI SRHCHELEVP MLVVHGEDDM VCASDSARTV YELAASKDKT LNIFPGMWHQ LIGEPKEGVE
301: LVFGTILTWI DSRAEKAKAN TNRLYVEQ

Best Arabidopsis Sequence Match ( AT5G14980.1 )
(BLAST)

001: MGLHPVSEAN ASSPFGSLSA AEFYSRHSVT HSSAYVTNPT GLKLFTQWWT PLNRPPLGLI AVVHGFTGES SWFLQLTSVL FAKSGYLTCA IDHQGHGFSD
101: GLTAHIPNIN LIVDDCISFF DDFRKRHASS FLPAFLYSES LGGAIALYIT LRQKHQWNGL ILSGAMCSIS HKFKPPWPLQ HLLTLAATLI PTWRVVPTRG
201: SIAGVSFKEP WKRKLAYANP NRTVGKPRAA TAYELVRVCE DLQNRFEEVE VPLMIVHGRD DVVCDPASVE ELYRRCSSRD KTIKIYPGMW HQLIGESEEN
301: VDLVFGDVLD WIKTRSEIST IHGGTKA

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LFQ7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.