Factsheet for VIT_09s0002g05730.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH19112	Soybean	cytosol	81.0	79.75
Solyc03g119980.2.1	Tomato	cytosol	80.06	78.59
Bra018986.1-P	Field mustard	cytosol	80.06	78.35
CDY62199	Canola	cytosol	80.06	78.35
CDY72184	Canola	cytosol	80.06	78.35
PGSC0003DMT400014303	Potato	cytosol	79.13	77.68
AT1G52760.1	Thale cress	cytosol	78.82	76.2
KRH02768	Soybean	cytosol	66.67	74.56
CDY62163	Canola	plastid	48.6	71.56
Bra030364.1-P	Field mustard	plastid	48.6	71.56
GSMUA_Achr5P24890_001	Banana	cytoskeleton, cytosol, peroxisome	71.96	67.15
Os02t0207900-01	Rice	plasma membrane	64.8	60.64
GSMUA_Achr7P08420_001	Banana	cytosol	63.55	57.79
VIT_10s0116g00730.t01	Wine grape	cytosol	37.69	38.53
VIT_00s0317g00110.t01	Wine grape	cytosol	32.4	32.6
VIT_07s0005g00510.t01	Wine grape	cytosol	35.2	32.38
VIT_10s0003g04950.t01	Wine grape	cytosol	33.02	32.32
VIT_13s0019g04260.t01	Wine grape	cytosol	31.78	31.0
VIT_14s0006g02900.t01	Wine grape	plastid	32.4	27.01
VIT_01s0011g03620.t01	Wine grape	cytosol, plastid	31.78	24.46
VIT_17s0000g01070.t01	Wine grape	plastid	26.48	21.3
VIT_17s0000g01010.t01	Wine grape	plastid	26.48	21.25
VIT_04s0008g03220.t01	Wine grape	cytosol	26.17	21.05

Protein Annotations

EntrezGene:100248095	wikigene:100248095	MapMan:21.6.1.3	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1
EMBL:AM428585	ProteinID:CAN62561	ProteinID:CAN62561.1	ProteinID:CCB59547	ProteinID:CCB59547.1	UniProt:F6HX77
EMBL:FN596494	GO:GO:0003674	GO:GO:0003824	GO:GO:0003846	GO:GO:0004622	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005794	GO:GO:0005886
GO:GO:0006629	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009506
GO:GO:0010043	GO:GO:0016020	GO:GO:0016298	GO:GO:0016740	GO:GO:0016787	GO:GO:0042542
GO:GO:0046686	GO:GO:0090430	InterPro:Hydrolase_4	InterPro:IPR029058	EntrezGene:LOC100248095	wikigene:LOC100248095
PFAM:PF12146	PRINTS:PR00111	PANTHER:PTHR11614	PANTHER:PTHR11614:SF90	MEROPS:S33.A37	SUPFAM:SSF53474
TIGR:TC69666	UniParc:UPI00015C848E	ArrayExpress:VIT_09s0002g05730	EnsemblPlantsGene:VIT_09s0002g05730	EnsemblPlants:VIT_09s0002g05730.t01	unigene:Vvi.3536
RefSeq:XP_002285258	RefSeq:XP_002285258.1	:	:	:	:

Description

No Description!

Coordinates

chr9:-:5499951..5501003

Molecular Weight (calculated)

36063.0 Da

IEP (calculated)

5.783

GRAVY (calculated)

-0.292

Length

321 amino acids

Sequence
(BLAST)

001: MSSESEISAN FWGDMPEEEY YASQGVRNTK SYFDTPNGKL FTQSFLPLDL PVKASVYMTH GYGSDTGWLF QKICINYATW GYAVFAADIL GHGRSDGIRC
101: YLGDMEKVAA TSLSFFKSVR TSESYRDLPA FLFGESMGGA TTMLVYFQSE PELWTGLIFS APLFVMPENM KPSKVRLFLY GLLFGMADTW ATMPDNKMVG
201: KAIKDPEKLK VIASNPRRYT GPPRVGTMRE LARVCQYIQD NFSKVTAPFL TVHGTADGVT CPTSSKLLYE KASSEDKALK LYEGMYHSLI QGEPDENANL
301: VLKDMREWID ERVERYGPSK S

Best Arabidopsis Sequence Match ( AT1G52760.1 )
(BLAST)

001: MPSEAESSAN SAPATPPPPP NFWGTMPEEE YYTSQGVRNS KSYFETPNGK LFTQSFLPLD GEIKGTVYMS HGYGSDTSWM FQKICMSFSS WGYAVFAADL
101: LGHGRSDGIR CYMGDMEKVA ATSLAFFKHV RCSDPYKDLP AFLFGESMGG LVTLLMYFQS EPETWTGLMF SAPLFVIPED MKPSKAHLFA YGLLFGLADT
201: WAAMPDNKMV GKAIKDPEKL KIIASNPQRY TGKPRVGTMR ELLRKTQYVQ ENFGKVTIPV FTAHGTADGV TCPTSSKLLY EKASSADKTL KIYEGMYHSL
301: IQGEPDENAE IVLKDMREWI DEKVKKYGSK TA

Arabidopsis Description

CSECaffeoylshikimate esterase [Source:UniProtKB/Swiss-Prot;Acc:Q9C942]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.