Factsheet for VIT_10s0116g00730.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome, secretory
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH20516	Soybean	cytosol	73.25	70.99
PGSC0003DMT400012910	Potato	cytosol	69.75	69.09
Solyc03g006560.2.1	Tomato	cytosol	64.33	68.71
AT1G11090.1	Thale cress	cytosol	68.15	66.05
GSMUA_Achr9P24530_001	Banana	cytosol	55.41	65.17
CDY20587	Canola	cytosol	66.24	64.8
Bra041073.1-P	Field mustard	cytosol	65.92	64.49
CDY20979	Canola	cytosol	65.61	63.98
TraesCS2A01G202200.1	Wheat	cytosol	62.1	58.91
Os07t0565700-01	Rice	cytosol	61.78	58.08
TraesCS2B01G229300.1	Wheat	cytosol	61.15	58.01
TraesCS2D01G208700.1	Wheat	cytosol	60.83	57.88
Zm00001d006611_P001	Maize	cytosol	60.51	56.89
EER99555	Sorghum	cytosol	60.51	56.21
HORVU2Hr1G039890.6	Barley	cytosol, mitochondrion	58.28	50.27
VIT_00s0317g00110.t01	Wine grape	cytosol	38.85	38.24
VIT_07s0005g00510.t01	Wine grape	cytosol	42.04	37.82
VIT_09s0002g05730.t01	Wine grape	cytosol	38.53	37.69
VIT_13s0019g04260.t01	Wine grape	cytosol	39.17	37.39
VIT_10s0003g04950.t01	Wine grape	cytosol	37.9	36.28
VIT_14s0006g02900.t01	Wine grape	plastid	40.76	33.25
VIT_01s0011g03620.t01	Wine grape	cytosol, plastid	35.35	26.62
VIT_17s0000g01010.t01	Wine grape	plastid	32.8	25.75
VIT_17s0000g01070.t01	Wine grape	plastid	32.48	25.56
VIT_04s0008g03220.t01	Wine grape	cytosol	30.89	24.31

Protein Annotations

EntrezGene:100855015	wikigene:100855015	Gene3D:3.40.50.1820	MapMan:35.1	UniProt:A5AIW6	InterPro:AB_hydrolase
InterPro:AB_hydrolase_1	EMBL:AM427761	ProteinID:CAN82216	ProteinID:CAN82216.1	ProteinID:CCB45274	ProteinID:CCB45274.1
EMBL:FN594992	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0005794	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0016020	GO:GO:0016298	GO:GO:0016787	GO:GO:0047372	InterPro:Hydrolase_4	InterPro:IPR029058
EntrezGene:LOC100855015	wikigene:LOC100855015	PFAM:PF12146	PRINTS:PR00111	PANTHER:PTHR11614	PANTHER:PTHR11614:SF20
SUPFAM:SSF53474	UniParc:UPI0001523A79	ArrayExpress:VIT_10s0116g00730	EnsemblPlantsGene:VIT_10s0116g00730	EnsemblPlants:VIT_10s0116g00730.t01	unigene:Vvi.11828
RefSeq:XP_003634858	RefSeq:XP_003634858.1	:	:	:	:

Description

No Description!

Coordinates

chr10_random:-:321216..322321

Molecular Weight (calculated)

35368.7 Da

IEP (calculated)

6.398

GRAVY (calculated)

-0.075

Length

314 amino acids

Sequence
(BLAST)

001: MDETDHQNRP YFWGNTPEEE YYNLQGIKSS KSLFTSTRGL SLFTRSWQPL STPPRALICM VHGYGNDISW TFQATPIFLA QMGFACFALD LQGHGQSEGL
101: KAYVPNVDLV VEDCVSFFNS IKQDVSFHGL PSILYGESMG GAICLLIHLS NPNSFQGAIL VAPMCKISDN VRPRWPIPQI LTFLARFFPT LPIVPTPDIL
201: DKSVKVPEKK IIAAMNPLRY KGKPRLGTVV ELLRITDYLS QKLGEVKLPF IVLHGSADAV TDPDVSRALY EEAKSEDKTI KIYYGMMHSL LFGETDENVD
301: IVRREILSWL NDRF

Best Arabidopsis Sequence Match ( AT1G11090.1 )
(BLAST)

001: MSDQQLETEI NFWGETSEED YFNLKGIIGS KSFFTSPRGL NLFTRSWLPS SSSPPRGLIF MVHGYGNDVS WTFQSTPIFL AQMGFACFAL DIEGHGRSDG
101: VRAYVPSVDL VVDDIISFFN SIKQNPKFQG LPRFLFGESM GGAICLLIQF ADPLGFDGAV LVAPMCKISD KVRPKWPVDQ FLIMISRFLP TWAIVPTEDL
201: LEKSIKVEEK KPIAKRNPMR YNEKPRLGTV MELLRVTDYL GKKLKDVSIP FIIVHGSADA VTDPEVSREL YEHAKSKDKT LKIYDGMMHS MLFGEPDDNI
301: EIVRKDIVSW LNDRCGGDKT KTQV

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:O04083]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.