Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra041073.1-P | Field mustard | cytosol | 83.64 | 84.42 |
| CDY20587 | Canola | cytosol | 83.02 | 83.8 |
| CDY20979 | Canola | cytosol | 83.02 | 83.54 |
| PGSC0003DMT400012910 | Potato | cytosol | 67.59 | 69.09 |
| VIT_10s0116g00730.t01 | Wine grape | cytosol | 66.05 | 68.15 |
| Solyc03g006560.2.1 | Tomato | cytosol | 60.49 | 66.67 |
| GSMUA_Achr9P24530_001 | Banana | cytosol | 51.85 | 62.92 |
| KRH20516 | Soybean | cytosol | 62.35 | 62.35 |
| TraesCS2B01G229300.1 | Wheat | cytosol | 59.88 | 58.61 |
| TraesCS2A01G202200.1 | Wheat | cytosol | 59.26 | 58.01 |
| TraesCS2D01G208700.1 | Wheat | cytosol | 58.64 | 57.58 |
| Os07t0565700-01 | Rice | cytosol | 59.26 | 57.48 |
| EER99555 | Sorghum | cytosol | 59.57 | 57.1 |
| Zm00001d006611_P001 | Maize | cytosol | 58.64 | 56.89 |
| HORVU2Hr1G039890.6 | Barley | cytosol, mitochondrion | 56.48 | 50.27 |
| AT2G39420.1 | Thale cress | cytosol | 41.67 | 42.59 |
| AT2G39410.2 | Thale cress | cytosol | 40.43 | 41.32 |
| AT2G39400.1 | Thale cress | cytosol | 38.89 | 40.51 |
| AT3G55180.1 | Thale cress | cytosol | 38.89 | 40.38 |
| AT1G52760.1 | Thale cress | cytosol | 39.81 | 38.86 |
| AT3G55190.1 | Thale cress | cytosol | 37.96 | 38.56 |
| AT5G19290.1 | Thale cress | cytoskeleton, cytosol, plastid | 38.27 | 37.58 |
| AT2G47630.1 | Thale cress | cytosol | 40.43 | 37.32 |
| AT3G62860.1 | Thale cress | cytosol | 39.51 | 36.78 |
| AT5G14980.1 | Thale cress | plastid | 36.73 | 36.39 |
| AT5G16120.4 | Thale cress | mitochondrion | 42.28 | 35.77 |
| AT1G77420.1 | Thale cress | cytosol | 34.57 | 29.32 |
| AT5G11650.1 | Thale cress | plastid | 31.48 | 26.15 |
| AT1G18360.1 | Thale cress | mitochondrion, plastid | 30.56 | 25.92 |
| AT1G73480.1 | Thale cress | mitochondrion, plastid | 32.41 | 22.68 |
Protein Annotations
| Gene3D:3.40.50.1820 | MapMan:35.1 | EntrezGene:837650 | UniProt:A0A178W4X0 | ProteinID:AAB65474.1 | InterPro:AB_hydrolase |
| InterPro:AB_hydrolase_1 | ProteinID:AEE28682.1 | EMBL:AK117716 | ArrayExpress:AT1G11090 | EnsemblPlantsGene:AT1G11090 | RefSeq:AT1G11090 |
| TAIR:AT1G11090 | RefSeq:AT1G11090-TAIR-G | EnsemblPlants:AT1G11090.1 | TAIR:AT1G11090.1 | Unigene:At.42152 | EMBL:BT008781 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005783 | GO:GO:0005794 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 |
| GO:GO:0016787 | GO:GO:0047372 | InterPro:Hydrolase_4 | InterPro:IPR029058 | RefSeq:NP_172576.1 | UniProt:O04083 |
| ProteinID:OAP13308.1 | PFAM:PF12146 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00111 | PANTHER:PTHR11614 | PANTHER:PTHR11614:SF20 | MEROPS:S33.A08 |
| SUPFAM:SSF53474 | UniParc:UPI0000048226 | SEG:seg | : | : | : |
Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:O04083]
Coordinates
chr1:+:3702608..3703779
Molecular Weight (calculated)
36563.2 Da
IEP (calculated)
6.064
GRAVY (calculated)
-0.165
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDQQLETEI NFWGETSEED YFNLKGIIGS KSFFTSPRGL NLFTRSWLPS SSSPPRGLIF MVHGYGNDVS WTFQSTPIFL AQMGFACFAL DIEGHGRSDG
101: VRAYVPSVDL VVDDIISFFN SIKQNPKFQG LPRFLFGESM GGAICLLIQF ADPLGFDGAV LVAPMCKISD KVRPKWPVDQ FLIMISRFLP TWAIVPTEDL
201: LEKSIKVEEK KPIAKRNPMR YNEKPRLGTV MELLRVTDYL GKKLKDVSIP FIIVHGSADA VTDPEVSREL YEHAKSKDKT LKIYDGMMHS MLFGEPDDNI
301: EIVRKDIVSW LNDRCGGDKT KTQV
101: VRAYVPSVDL VVDDIISFFN SIKQNPKFQG LPRFLFGESM GGAICLLIQF ADPLGFDGAV LVAPMCKISD KVRPKWPVDQ FLIMISRFLP TWAIVPTEDL
201: LEKSIKVEEK KPIAKRNPMR YNEKPRLGTV MELLRVTDYL GKKLKDVSIP FIIVHGSADA VTDPEVSREL YEHAKSKDKT LKIYDGMMHS MLFGEPDDNI
301: EIVRKDIVSW LNDRCGGDKT KTQV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.