Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83323 | Canola | cytosol | 87.75 | 88.76 |
| CDX95729 | Canola | cytosol | 87.18 | 88.18 |
| CDY55538 | Canola | cytosol | 85.47 | 86.21 |
| CDY27476 | Canola | cytosol | 84.33 | 85.3 |
| AT3G62860.1 | Thale cress | cytosol | 81.48 | 82.18 |
| VIT_07s0005g00510.t01 | Wine grape | cytosol | 70.09 | 70.49 |
| GSMUA_Achr8P30050_001 | Banana | cytosol | 65.24 | 69.82 |
| Solyc09g075140.2.1 | Tomato | cytosol | 66.1 | 65.91 |
| Bra021437.1-P | Field mustard | cytosol | 57.55 | 65.8 |
| PGSC0003DMT400081375 | Potato | cytosol | 65.53 | 65.34 |
| KRH68197 | Soybean | cytosol | 64.67 | 65.23 |
| TraesCS2B01G395400.1 | Wheat | cytosol | 63.53 | 65.2 |
| TraesCS2D01G374700.1 | Wheat | cytosol | 63.53 | 65.2 |
| HORVU1Hr1G058820.2 | Barley | peroxisome | 62.68 | 65.09 |
| EES00668 | Sorghum | cytosol | 64.39 | 64.94 |
| TraesCS2A01G378400.1 | Wheat | cytosol | 63.25 | 64.91 |
| TraesCS1D01G231500.1 | Wheat | peroxisome | 63.25 | 64.91 |
| EES18085 | Sorghum | cytosol | 64.96 | 64.59 |
| Zm00001d009907_P001 | Maize | cytosol | 63.25 | 64.53 |
| KRH69290 | Soybean | cytosol | 56.7 | 63.99 |
| Zm00001d040666_P003 | Maize | cytosol | 62.96 | 63.14 |
| Os05t0363100-01 | Rice | cytosol, nucleus, peroxisome | 62.68 | 62.68 |
| TraesCS1B01G243700.2 | Wheat | peroxisome | 62.96 | 58.93 |
| TraesCS1A01G230500.1 | Wheat | golgi, plastid | 59.54 | 57.26 |
| HORVU2Hr1G090120.10 | Barley | plastid | 61.82 | 52.04 |
| AT3G55180.1 | Thale cress | cytosol | 46.15 | 51.92 |
| Os01t0315600-01 | Rice | cytosol, plasma membrane, plastid | 23.36 | 51.9 |
| AT2G39400.1 | Thale cress | cytosol | 45.87 | 51.77 |
| AT2G39410.2 | Thale cress | cytosol | 46.72 | 51.73 |
| AT2G39420.1 | Thale cress | cytosol | 46.44 | 51.42 |
| AT3G55190.1 | Thale cress | cytosol | 40.46 | 44.51 |
| Os01t0315700-01 | Rice | cytosol | 14.81 | 40.62 |
| AT1G11090.1 | Thale cress | cytosol | 37.32 | 40.43 |
| Bra000456.1-P | Field mustard | nucleus | 84.05 | 35.12 |
| AT5G16120.4 | Thale cress | mitochondrion | 38.18 | 34.99 |
| AT5G14980.1 | Thale cress | plastid | 30.2 | 32.42 |
| AT1G77420.1 | Thale cress | cytosol | 34.19 | 31.41 |
| AT1G52760.1 | Thale cress | cytosol | 29.63 | 31.33 |
| AT5G19290.1 | Thale cress | cytoskeleton, cytosol, plastid | 28.21 | 30.0 |
| AT5G11650.1 | Thale cress | plastid | 25.93 | 23.33 |
| AT1G18360.1 | Thale cress | mitochondrion, plastid | 23.93 | 21.99 |
| AT1G73480.1 | Thale cress | mitochondrion, plastid | 24.79 | 18.79 |
Protein Annotations
| Gene3D:3.40.50.1820 | MapMan:5.7.1.1 | EntrezGene:819376 | ProteinID:AAC63619.2 | ProteinID:AAM14848.1 | InterPro:AB_hydrolase |
| ProteinID:AEC10866.1 | ArrayExpress:AT2G47630 | EnsemblPlantsGene:AT2G47630 | RefSeq:AT2G47630 | TAIR:AT2G47630 | RefSeq:AT2G47630-TAIR-G |
| EnsemblPlants:AT2G47630.1 | TAIR:AT2G47630.1 | EMBL:AY057711 | EMBL:AY116958 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016020 | GO:GO:0016787 | GO:GO:0047372 | InterPro:Hydrolase_4 | InterPro:IPR029058 | RefSeq:NP_566106.1 |
| UniProt:O22248 | PFAM:PF12146 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PANTHER:PTHR11614 | PANTHER:PTHR11614:SF120 | MEROPS:S33.A13 |
| SUPFAM:SSF53474 | UniParc:UPI00000A95C3 | : | : | : | : |
Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:O22248]
Coordinates
chr2:+:19534473..19537074
Molecular Weight (calculated)
39711.0 Da
IEP (calculated)
8.390
GRAVY (calculated)
-0.256
Length
351 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSSEFQYHE EYVRNSRGVE LFACRWIPSS SSSPKALVFL CHGYGMECSD SMKECGIRLA SAGYAVFGMD YEGHGRSMGS RCYIKKFANV VNDCYDYYTS
101: ICAQEEYMDK GRFLYGESMG GAVTLLLHKK DPLFWNGAIL VAPMCKISEK VKPHPIVINL LTRVEEIIPK WKIVPTKDVI DAAFKDLVKR EEVRNNKLIY
201: QDKPRLKTAL EMLRTSMNLE DTLHEITMPF FVLHGEADTV TDPEVSKALY EKASTRDKTL KLYPGMWHAL TSGEPDCNVD LVFADIINWL DLRTADPASL
301: TVTPIRVGNT TSVQRVTTVN GVSNGHRRPK RPFFNLLCGL NRGRLVPRST V
101: ICAQEEYMDK GRFLYGESMG GAVTLLLHKK DPLFWNGAIL VAPMCKISEK VKPHPIVINL LTRVEEIIPK WKIVPTKDVI DAAFKDLVKR EEVRNNKLIY
201: QDKPRLKTAL EMLRTSMNLE DTLHEITMPF FVLHGEADTV TDPEVSKALY EKASTRDKTL KLYPGMWHAL TSGEPDCNVD LVFADIINWL DLRTADPASL
301: TVTPIRVGNT TSVQRVTTVN GVSNGHRRPK RPFFNLLCGL NRGRLVPRST V
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.