Factsheet for Bra000456.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83323	Canola	cytosol	39.52	95.68
CDX95729	Canola	cytosol	39.52	95.68
AT2G47630.1	Thale cress	cytosol	35.12	84.05
Bra014388.1-P	Field mustard	cytosol	30.0	83.17
VIT_07s0005g00510.t01	Wine grape	cytosol	29.17	70.2
Solyc09g075140.2.1	Tomato	cytosol	28.57	68.18
GSMUA_Achr8P30050_001	Banana	cytosol	26.55	67.99
Bra021437.1-P	Field mustard	cytosol	24.64	67.43
PGSC0003DMT400081375	Potato	cytosol	27.98	66.76
KRH68197	Soybean	cytosol	27.26	65.8
EES00668	Sorghum	cytosol	26.67	64.37
HORVU1Hr1G058820.2	Barley	peroxisome	25.83	64.2
TraesCS2B01G395400.1	Wheat	cytosol	25.95	63.74
TraesCS1D01G231500.1	Wheat	peroxisome	25.95	63.74
EES18085	Sorghum	cytosol	26.67	63.46
TraesCS2D01G374700.1	Wheat	cytosol	25.83	63.45
TraesCS2A01G378400.1	Wheat	cytosol	25.71	63.16
Zm00001d009907_P001	Maize	cytosol	25.83	63.08
KRH69290	Soybean	cytosol	23.21	62.7
Zm00001d040666_P003	Maize	cytosol	26.07	62.57
Os05t0363100-01	Rice	cytosol, nucleus, peroxisome	25.71	61.54
TraesCS1B01G243700.2	Wheat	peroxisome	25.83	57.87
TraesCS1A01G230500.1	Wheat	golgi, plastid	24.64	56.71
Bra000132.1-P	Field mustard	mitochondrion	19.52	53.59
Bra007148.1-P	Field mustard	cytosol	18.33	53.1
Bra017076.1-P	Field mustard	cytosol	19.4	51.42
HORVU2Hr1G090120.10	Barley	plastid	25.24	50.84
Bra017077.1-P	Field mustard	cytosol	18.81	50.8
Os01t0315600-01	Rice	cytosol, plasma membrane, plastid	9.29	49.37
Bra007707.1-P	Field mustard	cytosol	30.36	45.45
Os01t0315700-01	Rice	cytosol	6.31	41.41
Bra008644.1-P	Field mustard	cytosol	16.19	41.09
Bra041073.1-P	Field mustard	cytosol	15.48	40.5
Bra003685.1-P	Field mustard	cytosol	8.21	36.32
Bra018986.1-P	Field mustard	cytosol	12.5	32.01
Bra008307.1-P	Field mustard	cytosol, plastid	14.29	31.41
Bra030364.1-P	Field mustard	plastid	8.1	31.19
Bra020032.1-P	Field mustard	cytosol	12.26	30.75
Bra002224.1-P	Field mustard	cytosol	12.26	30.75
Bra023553.1-P	Field mustard	cytosol	16.19	24.55
Bra003843.1-P	Field mustard	golgi, vacuole	10.6	23.3
Bra008947.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	10.6	22.82
Bra016558.1-P	Field mustard	cytosol, nucleus, plastid	10.0	21.43
Bra015989.1-P	Field mustard	plastid	10.36	21.38

Protein Annotations

Gene3D:1.10.10.10	Gene3D:1.10.10.60	MapMan:12.4.2.1	Gene3D:3.40.50.1820	MapMan:5.7.1.1	InterPro:AB_hydrolase
EnsemblPlantsGene:Bra000456	EnsemblPlants:Bra000456.1	EnsemblPlants:Bra000456.1-P	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	InterPro:Homeobox-like_sf	InterPro:Hydrolase_4	InterPro:IPR007526	InterPro:IPR017884	InterPro:IPR029058
InterPro:IPR036388	UniProt:M4C8C8	PFAM:PF00249	PFAM:PF04433	PFAM:PF12146	PFAM:PF16495
PFscan:PS50934	PFscan:PS51293	PANTHER:PTHR11614	PANTHER:PTHR11614:SF120	InterPro:SANT/Myb	InterPro:SANT_dom
SMART:SM00717	InterPro:SMARCC_C	SUPFAM:SSF46689	SUPFAM:SSF53474	InterPro:SWIRM	UniParc:UPI000253FF36
InterPro:WH-like_DNA-bd_sf	SEG:seg	:	:	:	:

Description

AT2G47630 (E=2e-170) | esterase/lipase/thioesterase family protein

Coordinates

chrA03:+:11200162..11205001

Molecular Weight (calculated)

94157.1 Da

IEP (calculated)

4.969

GRAVY (calculated)

-0.354

Length

840 amino acids

Sequence
(BLAST)

001: MEVSTKDAEL ELFTIPAHSS WFVWEDIHEI ERREFAEFFS ESSITRTPKV YKEYRDFIIN KYREDDSSKR LTFTSIRKYL VGDVNLLRKV FLFLENWGLI
101: NYLKRSDDGS MEESEVKIEQ GTPAGIRVTA TPVSMRPLTV PPLVEERAEP AFKFSPLTSY SDVFTDLKKP LVCGHCGGES SCDSAFYQHT KSIVSLCDKC
201: FKNGDYGENN SPDDFKLIAA ASWTEEETLL LLESVLKHGD DWDLIAQSVS TKTRLDCISK LIELPFGEFL MGSSSGRLRS SIPTSEDENL SSPSNLVDQM
301: KADGQEQKET ETREEKEEDH VVDEDEPPAK RKRVAMLSDG GDSSLMKQVA AMACKVGPSV ATAAAKAAIA ALCDEASCPK DTFETTCDFT DFAVDRADGD
401: KGTSDMEEQQ EDKEGPQDLP VALRMRASVA TALGAAAAHA KILADQEERE MEQLAAIIID QQLKKMKSKL KFLDHLELIM DAEEQVMEGV KETILQERIS
501: VLQFAFGSGI TKRWDHTWIP SSSPKALVFL CHGYGMECSD SMRECGIRLA SAGYAVFGMD YEGHGRSMGS RCYIKKFSNI VNDCYNYYTS ICAQEEYMEK
601: GRFLYGESMG GAVTLLLHKK DPSFWNGAIL VAPMCKISEK VKPHPVVINL LTRVEEMIPK WKIVPTKDVI NAAFKDLAKR EEVRNNKLIY QDKPRLKTAL
701: EMLRTSMNLE DSLHEITMPF FVLHGEADIV TDPEISKALY EKASSRDKTL KLYPGMWHAL TSGEPDYNVD LVFADIISWL DHRTADPASL TVTPIRANTT
801: ASVERVFVDG VSSGQRRPRR AYFSLLCGLN GGRLVPRSAM

Best Arabidopsis Sequence Match ( AT2G47620.1 )
(BLAST)

001: MEATDPSAEI ELYTIPAQSS WFLWDDIHEI ERREFAEFFT ESSITRTPKV YKEYRDFIIN KFREDTCRRL TFTSVRKFLV GDVNLLQKVF LFLEKWGLIN
101: FSSSLKKNDH LLSVDNAKIE QGTPAGIRVT ATPNSLRPIT APPLVEERVE TGIKVPPLTS YSDVFSDLKK PDHVLVCAHC GERCDSPFYQ HNKGIVNICE
201: KCFKNGNYGE NNTADDFKLI GNSAAAVWTE EEILLLLESV LKHGDDWELI SQSVSTKSRL DCISKLIELP FGEFLMGSAS GRLNPSILTE DENTEQVQTD
301: GQEHEETETR EEKEDRVNED EPPAKRKRVA LISEGDSSLM KQVAAMASKV GPSVATAAAK AALAALCDEA SCPKEIFDTD DYSNFTVDRA NGEKDTDMEE
401: QQEEKDGPQG LPVALRIRAS VATALGAAAA QAKILADQEE REMEQLAATV IEQQLKKLQS KLKFLDDLES IMDEEEKVIE GVKETIIQER VSVLQCAFRS
501: GITKRWDHTY VK

Arabidopsis Description

SWI3ASWI/SNF complex subunit SWI3A [Source:UniProtKB/Swiss-Prot;Acc:Q8W475]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.