Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS2D01G374700.1 | Wheat | cytosol | 77.46 | 94.44 |
TraesCS2B01G395400.1 | Wheat | cytosol | 76.26 | 92.98 |
TraesCS2A01G378400.1 | Wheat | cytosol | 76.26 | 92.98 |
EES00668 | Sorghum | cytosol | 67.15 | 80.46 |
Zm00001d040666_P003 | Maize | cytosol | 66.43 | 79.14 |
HORVU1Hr1G058820.2 | Barley | peroxisome | 61.15 | 75.44 |
GSMUA_Achr8P30050_001 | Banana | cytosol | 53.96 | 68.6 |
Os01t0315700-01 | Rice | cytosol | 20.62 | 67.19 |
VIT_07s0005g00510.t01 | Wine grape | cytosol | 54.44 | 65.04 |
KRH68197 | Soybean | cytosol | 53.96 | 64.66 |
CDX76667 | Canola | cytosol | 52.28 | 64.5 |
Solyc09g075140.2.1 | Tomato | cytosol | 54.2 | 64.2 |
PGSC0003DMT400081375 | Potato | cytosol | 53.96 | 63.92 |
CDX83323 | Canola | cytosol | 52.76 | 63.4 |
CDX95729 | Canola | cytosol | 52.52 | 63.11 |
AT3G62860.1 | Thale cress | cytosol | 52.52 | 62.93 |
Bra014388.1-P | Field mustard | cytosol | 45.56 | 62.71 |
CDX93957 | Canola | cytosol | 45.08 | 62.46 |
AT2G47630.1 | Thale cress | cytosol | 52.04 | 61.82 |
CDY55538 | Canola | cytosol | 51.56 | 61.78 |
CDY27476 | Canola | cytosol | 51.32 | 61.67 |
KRH69290 | Soybean | cytosol | 45.8 | 61.41 |
CDX89152 | Canola | mitochondrion | 52.52 | 59.03 |
Os01t0315600-01 | Rice | cytosol, plasma membrane, plastid | 21.82 | 57.59 |
HORVU5Hr1G049360.1 | Barley | cytosol | 38.85 | 54.18 |
HORVU4Hr1G024280.2 | Barley | cytosol | 39.09 | 51.26 |
CDY11452 | Canola | cytosol | 45.56 | 50.0 |
Bra021437.1-P | Field mustard | cytosol | 35.49 | 48.21 |
HORVU3Hr1G087040.1 | Barley | cytosol | 17.75 | 47.13 |
HORVU5Hr1G049370.7 | Barley | mitochondrion | 38.37 | 42.22 |
HORVU3Hr1G086980.2 | Barley | extracellular | 16.79 | 41.67 |
HORVU3Hr1G087020.4 | Barley | mitochondrion | 35.01 | 40.33 |
Bra007707.1-P | Field mustard | cytosol | 53.96 | 40.11 |
HORVU5Hr1G077350.3 | Barley | plastid | 32.37 | 36.0 |
HORVU2Hr1G039890.6 | Barley | cytosol, mitochondrion | 30.7 | 35.16 |
HORVU3Hr1G063840.1 | Barley | mitochondrion, plastid | 30.7 | 34.04 |
Bra000456.1-P | Field mustard | nucleus | 50.84 | 25.24 |
HORVU4Hr1G008550.3 | Barley | endoplasmic reticulum, golgi | 21.1 | 23.1 |
HORVU3Hr1G027160.1 | Barley | golgi, mitochondrion | 22.54 | 23.04 |
Protein Annotations
EnsemblPlants:HORVU2Hr1G090120.10 | EnsemblPlantsGene:HORVU2Hr1G090120 | Gene3D:3.40.50.1820 | InterPro:AB_hydrolase | InterPro:AB_hydrolase_1 | InterPro:Hydrolase_4 |
InterPro:IPR029058 | PANTHER:PTHR11614 | PANTHER:PTHR11614:SF120 | PFAM:PF12146 | PRINTS:PR00111 | SEG:seg |
SUPFAM:SSF53474 | UniParc:UPI000B47575C | UniProt:A0A287IW36 | MapMan:5.7.1.1 | : | : |
Description
No Description!
Coordinates
chrchr2H:-:642176424..642181381
Molecular Weight (calculated)
46685.1 Da
IEP (calculated)
9.542
GRAVY (calculated)
-0.447
Length
417 amino acids
Sequence
(BLAST)
(BLAST)
001: VTGQHRVRTL APLSSAAPEN PTYATQPSPA LPHRSSPAST RTSPPSIHLP YLLPSSSRRR SPTCPPPSRK ASSSRMDVEY HEEYVRNSSG VQLFTCGWLP
101: ASTSPKALTI RYPGYGMECS GFMRACGVRL AAAGYGVFGM DYEGHGKSMG TRCYIRSFHR LVDDCDRFYK SICDLEEYRN KSRFLYGESM GGAVALLLHR
201: KDPTFWDGAV LVAPMCKISE KVKPHPLVIT ALTQVEDVIP KWKIVPTKDV IDAAFKDPDK REKIRKNKLI YQDKPRLKTA LEMLRTSMYV EGSLSKVKLP
301: FLVLHGEADT VTDPEVSRAL YEHAASTDKA IKLYPGMWHG LTAGEPDENV EVIFADIIAW LNARRRVWTL EERLTKMLAA PKNLDADEKD HGSTVPRRRR
401: GGFLCGLTGR THHHSEM
101: ASTSPKALTI RYPGYGMECS GFMRACGVRL AAAGYGVFGM DYEGHGKSMG TRCYIRSFHR LVDDCDRFYK SICDLEEYRN KSRFLYGESM GGAVALLLHR
201: KDPTFWDGAV LVAPMCKISE KVKPHPLVIT ALTQVEDVIP KWKIVPTKDV IDAAFKDPDK REKIRKNKLI YQDKPRLKTA LEMLRTSMYV EGSLSKVKLP
301: FLVLHGEADT VTDPEVSRAL YEHAASTDKA IKLYPGMWHG LTAGEPDENV EVIFADIIAW LNARRRVWTL EERLTKMLAA PKNLDADEKD HGSTVPRRRR
401: GGFLCGLTGR THHHSEM
001: MMKFKFQYEE EYIKNSRDVE LFACRWLPSS SPRALVFLCH GYGMECSSFM RECGIRLASA GYAVFGMDYE GHGRSKGARC YIKKFSNIVN DCFDYYTSIS
101: AQEEYKEKGR FLYGESMGGA VALLLHKKDP SFWNGALLVA PMCKISEKVK PHPVVINLLT RVEDIIPKWK IVPTKDVIDA AFKDPVKREE IRNNKLIYQD
201: KPRLKTALEM LRTSMDLEDT LHEITLPFFV LHGEADIVTD PEISKALFEK ASTRDKTIKL YPGMWHGLTS GEPDANVDLV FADIVNWLDA RTGDSASLTV
301: TPVHDFTSNV QKVVDGVSNG QGKSKRPQAS LLCGLNGGGR RLVHRSSM
101: AQEEYKEKGR FLYGESMGGA VALLLHKKDP SFWNGALLVA PMCKISEKVK PHPVVINLLT RVEDIIPKWK IVPTKDVIDA AFKDPVKREE IRNNKLIYQD
201: KPRLKTALEM LRTSMDLEDT LHEITLPFFV LHGEADIVTD PEISKALFEK ASTRDKTIKL YPGMWHGLTS GEPDANVDLV FADIVNWLDA RTGDSASLTV
301: TPVHDFTSNV QKVVDGVSNG QGKSKRPQAS LLCGLNGGGR RLVHRSSM
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IZK0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.