CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY55538	Canola	cytosol	97.41	97.13
CDX83323	Canola	cytosol	89.91	89.91
CDX95729	Canola	cytosol	89.63	89.63
AT2G47630.1	Thale cress	cytosol	85.3	84.33
CDX76667	Canola	cytosol	78.1	80.18
CDX93957	Canola	cytosol	69.16	79.73
CDX89152	Canola	mitochondrion	80.12	74.93
Bra021437.1-P	Field mustard	cytosol	63.4	71.66
VIT_07s0005g00510.t01	Wine grape	cytosol	70.32	69.91
GSMUA_Achr8P30050_001	Banana	cytosol	64.84	68.6
Solyc09g075140.2.1	Tomato	cytosol	69.16	68.18
PGSC0003DMT400081375	Potato	cytosol	68.01	67.05
KRH68197	Soybean	cytosol	66.86	66.67
HORVU1Hr1G058820.2	Barley	peroxisome	63.11	64.79
EES00668	Sorghum	cytosol	64.84	64.66
TraesCS1D01G231500.1	Wheat	peroxisome	63.11	64.04
TraesCS2B01G395400.1	Wheat	cytosol	63.11	64.04
TraesCS2D01G374700.1	Wheat	cytosol	63.11	64.04
Zm00001d009907_P001	Maize	cytosol	63.4	63.95
EES18085	Sorghum	cytosol	64.84	63.74
KRH69290	Soybean	cytosol	57.06	63.67
TraesCS2A01G378400.1	Wheat	cytosol	62.54	63.45
Os05t0363100-01	Rice	cytosol, nucleus, peroxisome	63.69	62.96
Zm00001d040666_P003	Maize	cytosol	62.82	62.29
CDY11452	Canola	cytosol	67.44	61.58
TraesCS1B01G243700.2	Wheat	peroxisome	63.4	58.67
TraesCS1A01G230500.1	Wheat	golgi, plastid	59.37	56.44
CDX93264	Canola	cytosol	48.13	52.52
Os01t0315600-01	Rice	cytosol, plasma membrane, plastid	23.63	51.9
CDY40205	Canola	cytosol	45.24	51.64
HORVU2Hr1G090120.10	Barley	plastid	61.67	51.32
CDX73397	Canola	cytosol	44.96	51.32
CDY72172	Canola	cytosol	23.05	50.96
CDY07008	Canola	cytosol	46.4	50.63
CDY24963	Canola	cytosol	46.4	50.63
CDY07006	Canola	cytosol	44.96	50.16
CDY07007	Canola	cytosol	31.99	48.9
CDY07651	Canola	cytosol	47.26	45.43
CDX79202	Canola	cytosol	22.48	43.58
CDY20587	Canola	cytosol	38.62	41.74
CDX76116	Canola	cytosol	41.5	41.62
CDY20979	Canola	cytosol	38.04	40.99
Os01t0315700-01	Rice	cytosol	14.99	40.62
CDY02917	Canola	cytosol, endoplasmic reticulum, vacuole	41.5	39.13
CDX69469	Canola	mitochondrion	37.46	36.01
CDX68059	Canola	cytosol	19.6	35.79
CDY26499	Canola	mitochondrion	36.31	33.69
CDX85571	Canola	plastid	30.84	32.62
CDY72184	Canola	cytosol	30.84	32.62
CDY62199	Canola	cytosol	30.84	32.62
CDY62163	Canola	plastid	19.6	31.19
CDY40888	Canola	plastid	34.29	31.15
CDY38348	Canola	plastid	34.29	31.07
CDY40890	Canola	plastid	34.29	31.07
CDY44908	Canola	cytosol	29.97	31.04
CDY69863	Canola	cytosol	29.68	30.75
CDY13986	Canola	cytosol	29.39	30.45
CDX92543	Canola	cytosol	29.39	30.09
CDX93265	Canola	cytosol	45.24	26.04
CDX96478	Canola	plastid	23.63	22.65
CDX97130	Canola	cytosol, endoplasmic reticulum, golgi, plastid	25.36	22.56
CDX69743	Canola	cytosol, endoplasmic reticulum, golgi, plastid	25.36	22.56
CDX83852	Canola	plastid	24.5	22.43
CDX96722	Canola	plastid	24.5	21.91
CDX85514	Canola	cytosol	38.62	21.75
CDY38132	Canola	mitochondrion	37.75	21.65
CDX72991	Canola	plastid	25.07	21.38
CDX68225	Canola	mitochondrion	25.36	18.92
CDY11104	Canola	plastid	25.07	18.83

Protein Annotations

EnsemblPlants:CDY27476	EnsemblPlantsGene:GSBRNA2T00038129001	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:Hydrolase_4	InterPro:IPR029058
ncoils:Coil	PANTHER:PTHR11614	PANTHER:PTHR11614:SF120	PFAM:PF12146	ProteinID:CDY27476	ProteinID:CDY27476.1
SEG:seg	SUPFAM:SSF53474	UniParc:UPI0004EC4877	UniProt:A0A078GQ93	MapMan:5.7.1.1	:

Description

BnaC04g51170DBnaC04g51170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GQ93]

Coordinates

chrLK032205:-:84010..86491

Molecular Weight (calculated)

39163.3 Da

IEP (calculated)

8.443

GRAVY (calculated)

-0.320

Length

347 amino acids

Sequence
(BLAST)

001: MKSEFQYHED YIKNSRGVEL FACRWIPSSS PKALVFLCHG YGMECSDSMR ECGVRLASAG YAVFGMDYEG HGRSMGARCY IKKFENIVND CYDYYTSICA
101: QEEYMEKGRF LYGESMGGAV TLLLHKKDPS FWNGAILVAP MCKISEKVKP HPVVINLLTR VEEMIPKWKI VPTKNVINVA FKDLAKREKV KNNKLIYQDK
201: PRLKTALEML RTSMNLEDSL DEITMPFFVL HGEADIVTDP EISKALYEKA SSRDKTLKLY PGMWHALTSG EPDYNVDLVF ADITNWLDRR TDDPASLSVT
301: PVRATATASV ERDIVTSNGK RRAKRSYLNL LCGLNGGRLA PRSGGAM

Best Arabidopsis Sequence Match ( AT2G47630.1 )
(BLAST)

001: MKSSEFQYHE EYVRNSRGVE LFACRWIPSS SSSPKALVFL CHGYGMECSD SMKECGIRLA SAGYAVFGMD YEGHGRSMGS RCYIKKFANV VNDCYDYYTS
101: ICAQEEYMDK GRFLYGESMG GAVTLLLHKK DPLFWNGAIL VAPMCKISEK VKPHPIVINL LTRVEEIIPK WKIVPTKDVI DAAFKDLVKR EEVRNNKLIY
201: QDKPRLKTAL EMLRTSMNLE DTLHEITMPF FVLHGEADTV TDPEVSKALY EKASTRDKTL KLYPGMWHAL TSGEPDCNVD LVFADIINWL DLRTADPASL
301: TVTPIRVGNT TSVQRVTTVN GVSNGHRRPK RPFFNLLCGL NRGRLVPRST V

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:O22248]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.