Subcellular Localization
min:
: max
Winner_takes_all: golgi, plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- golgi 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G231500.1 | Wheat | peroxisome | 86.03 | 91.81 |
| HORVU1Hr1G058820.2 | Barley | peroxisome | 80.82 | 87.28 |
| TraesCS1B01G243700.2 | Wheat | peroxisome | 84.93 | 82.67 |
| Zm00001d009907_P001 | Maize | cytosol | 72.05 | 76.45 |
| EES18085 | Sorghum | cytosol | 73.7 | 76.2 |
| Os05t0363100-01 | Rice | cytosol, nucleus, peroxisome | 70.41 | 73.22 |
| TraesCS2A01G378400.1 | Wheat | cytosol | 66.3 | 70.76 |
| GSMUA_Achr8P30050_001 | Banana | cytosol | 62.19 | 69.21 |
| VIT_07s0005g00510.t01 | Wine grape | cytosol | 61.1 | 63.9 |
| KRH68197 | Soybean | cytosol | 59.18 | 62.07 |
| CDX76667 | Canola | cytosol | 56.44 | 60.95 |
| CDX83323 | Canola | cytosol | 57.81 | 60.81 |
| Bra014388.1-P | Field mustard | cytosol | 50.41 | 60.73 |
| CDX95729 | Canola | cytosol | 57.53 | 60.52 |
| Solyc09g075140.2.1 | Tomato | cytosol | 58.08 | 60.23 |
| PGSC0003DMT400081375 | Potato | cytosol | 58.08 | 60.23 |
| CDX93957 | Canola | cytosol | 49.59 | 60.13 |
| AT3G62860.1 | Thale cress | cytosol | 56.99 | 59.77 |
| AT2G47630.1 | Thale cress | cytosol | 57.26 | 59.54 |
| CDY27476 | Canola | cytosol | 56.44 | 59.37 |
| CDY55538 | Canola | cytosol | 56.44 | 59.2 |
| KRH69290 | Soybean | cytosol | 50.41 | 59.16 |
| CDX89152 | Canola | mitochondrion | 55.89 | 54.99 |
| TraesCS5A01G157600.2 | Wheat | cytosol | 42.47 | 51.84 |
| TraesCS4A01G178300.1 | Wheat | cytosol | 42.74 | 49.68 |
| TraesCS3A01G355000.1 | Wheat | cytosol | 36.99 | 47.7 |
| CDY11452 | Canola | cytosol | 49.59 | 47.63 |
| TraesCS5A01G157700.1 | Wheat | cytosol | 43.56 | 47.46 |
| Bra021437.1-P | Field mustard | cytosol | 39.73 | 47.23 |
| TraesCS3A01G355100.1 | Wheat | cytosol | 37.26 | 45.48 |
| TraesCS2A01G202200.1 | Wheat | cytosol | 36.44 | 40.18 |
| Bra007707.1-P | Field mustard | cytosol | 56.44 | 36.72 |
| TraesCS5A01G292100.1 | Wheat | plastid | 37.26 | 36.46 |
| TraesCS4A01G263500.1 | Wheat | cytosol | 28.49 | 32.0 |
| TraesCS3A01G263400.1 | Wheat | mitochondrion, plastid | 32.6 | 31.65 |
| Bra000456.1-P | Field mustard | nucleus | 56.71 | 24.64 |
| TraesCS4A01G263200.1 | Wheat | endoplasmic reticulum, golgi | 24.93 | 23.82 |
| TraesCS5A01G202900.1 | Wheat | mitochondrion, plastid | 24.11 | 22.56 |
| TraesCS3A01G312100.1 | Wheat | cytosol | 22.74 | 21.34 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G230500.1 | EnsemblPlantsGene:TraesCS1A01G230500 | Gene3D:3.40.50.1820 | InterPro:AB_hydrolase | InterPro:AB_hydrolase_1 | InterPro:Hydrolase_4 |
| InterPro:IPR029058 | PANTHER:PTHR11614 | PANTHER:PTHR11614:SF120 | PFAM:PF12146 | PRINTS:PR00111 | SEG:seg |
| SUPFAM:SSF53474 | TMHMM:TMhelix | MapMan:5.7.1.1 | : | : | : |
Description
No Description!
Coordinates
chr1A:-:403026997..403031253
Molecular Weight (calculated)
40812.8 Da
IEP (calculated)
8.987
GRAVY (calculated)
-0.143
Length
365 amino acids
Sequence
(BLAST)
(BLAST)
001: MPTCLISRLQ ARTASDGACA SGWILIMFIM MRLMVSRLIL QEYVRNPRGV QLFTCGWLPA SSSPKALVFL CHACGFKLAA AGYGVFGIDY EGHGKSMGAR
101: CYIQKFDRLV ADCDRFFKSI CDMEEYRSKS RFLYGESMGG AVALLLHRRD PAFWDGAVLV APMCKISEKV KPHPVVVTLL TQVEELIPTW KIVPTKDVID
201: SAFKDPLKRE HIRRNKLIYQ DKPRLKTALE LLRTSMDVED SLAEVSMPFF ILHGEADTVT DPEVSRALYD RAASADKTIK LYPGMWHGLT AGEPDDNVEL
301: VFADIVAWLN KRSHHRKPEH GGRVGSAPSE PARYQRRPVS GGSGMDSPVS IPRRRGGFLC GQCRM
101: CYIQKFDRLV ADCDRFFKSI CDMEEYRSKS RFLYGESMGG AVALLLHRRD PAFWDGAVLV APMCKISEKV KPHPVVVTLL TQVEELIPTW KIVPTKDVID
201: SAFKDPLKRE HIRRNKLIYQ DKPRLKTALE LLRTSMDVED SLAEVSMPFF ILHGEADTVT DPEVSRALYD RAASADKTIK LYPGMWHGLT AGEPDDNVEL
301: VFADIVAWLN KRSHHRKPEH GGRVGSAPSE PARYQRRPVS GGSGMDSPVS IPRRRGGFLC GQCRM
001: MKSSEFQYHE EYVRNSRGVE LFACRWIPSS SSSPKALVFL CHGYGMECSD SMKECGIRLA SAGYAVFGMD YEGHGRSMGS RCYIKKFANV VNDCYDYYTS
101: ICAQEEYMDK GRFLYGESMG GAVTLLLHKK DPLFWNGAIL VAPMCKISEK VKPHPIVINL LTRVEEIIPK WKIVPTKDVI DAAFKDLVKR EEVRNNKLIY
201: QDKPRLKTAL EMLRTSMNLE DTLHEITMPF FVLHGEADTV TDPEVSKALY EKASTRDKTL KLYPGMWHAL TSGEPDCNVD LVFADIINWL DLRTADPASL
301: TVTPIRVGNT TSVQRVTTVN GVSNGHRRPK RPFFNLLCGL NRGRLVPRST V
101: ICAQEEYMDK GRFLYGESMG GAVTLLLHKK DPLFWNGAIL VAPMCKISEK VKPHPIVINL LTRVEEIIPK WKIVPTKDVI DAAFKDLVKR EEVRNNKLIY
201: QDKPRLKTAL EMLRTSMNLE DTLHEITMPF FVLHGEADTV TDPEVSKALY EKASTRDKTL KLYPGMWHAL TSGEPDCNVD LVFADIINWL DLRTADPASL
301: TVTPIRVGNT TSVQRVTTVN GVSNGHRRPK RPFFNLLCGL NRGRLVPRST V
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:O22248]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.