CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 4
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0005g00510.t01	Wine grape	cytosol	72.41	72.21
GSMUA_Achr8P30050_001	Banana	cytosol	66.67	70.73
CDX76667	Canola	cytosol	67.53	69.53
Solyc09g075140.2.1	Tomato	cytosol	69.25	68.47
Bra014388.1-P	Field mustard	cytosol	59.48	68.32
KRH69290	Soybean	cytosol	60.92	68.17
CDX93957	Canola	cytosol	58.91	68.11
CDX83323	Canola	cytosol	67.53	67.72
AT3G62860.1	Thale cress	cytosol	67.53	67.53
EES00668	Sorghum	cytosol	67.53	67.53
CDX95729	Canola	cytosol	67.24	67.44
PGSC0003DMT400081375	Potato	cytosol	68.1	67.33
TraesCS2A01G378400.1	Wheat	cytosol	66.09	67.25
TraesCS2D01G374700.1	Wheat	cytosol	66.09	67.25
TraesCS1D01G231500.1	Wheat	peroxisome	65.8	66.96
CDY27476	Canola	cytosol	66.67	66.86
CDY55538	Canola	cytosol	66.38	66.38
TraesCS2B01G395400.1	Wheat	cytosol	65.23	66.37
HORVU1Hr1G058820.2	Barley	peroxisome	64.37	66.27
Zm00001d040666_P003	Maize	cytosol	66.38	66.0
EES18085	Sorghum	cytosol	66.67	65.72
Zm00001d009907_P001	Maize	cytosol	64.37	65.12
AT2G47630.1	Thale cress	cytosol	65.23	64.67
CDX89152	Canola	mitochondrion	68.1	63.88
Os05t0363100-01	Rice	cytosol, nucleus, peroxisome	64.37	63.82
TraesCS1B01G243700.2	Wheat	peroxisome	65.8	61.07
TraesCS1A01G230500.1	Wheat	golgi, plastid	62.07	59.18
CDY11452	Canola	cytosol	59.48	54.47
HORVU2Hr1G090120.10	Barley	plastid	64.66	53.96
Bra021437.1-P	Field mustard	cytosol	47.13	53.42
Os01t0315600-01	Rice	cytosol, plasma membrane, plastid	23.56	51.9
KRG93887	Soybean	cytosol	28.45	49.75
KRG92965	Soybean	cytosol	45.69	48.62
KRH36216	Soybean	nucleus	45.11	45.24
KRH48488	Soybean	cytosol	28.45	44.39
Os01t0315700-01	Rice	cytosol	16.09	43.75
KRH18244	Soybean	cytosol	41.38	41.74
Bra007707.1-P	Field mustard	cytosol	65.8	40.82
KRH20516	Soybean	cytosol	36.78	39.51
KRH39183	Soybean	cytosol	38.79	38.14
KRH34878	Soybean	cytosol	31.03	33.23
KRH02768	Soybean	cytosol	27.3	33.1
KRH75362	Soybean	nucleus	37.36	32.99
KRH19112	Soybean	cytosol	30.75	32.82
KRG90831	Soybean	plastid	36.21	31.82
KRH35942	Soybean	plastid	34.48	31.33
KRH60583	Soybean	peroxisome	25.29	30.99
KRH39013	Soybean	cytosol, mitochondrion, peroxisome, plastid	15.23	30.29
Bra000456.1-P	Field mustard	nucleus	65.8	27.26
KRH41883	Soybean	endoplasmic reticulum, golgi	27.3	26.39
KRH62086	Soybean	plastid	27.01	24.87
KRH48707	Soybean	endoplasmic reticulum, golgi	27.01	24.87
KRH52771	Soybean	cytosol, endoplasmic reticulum, peroxisome	25.86	24.66

Protein Annotations

EntrezGene:100783471	Gene3D:3.40.50.1820	MapMan:5.7.1.1	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	EMBL:ACUP02002104
EnsemblPlantsGene:GLYMA_03G214800	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016298	GO:GO:0016787	InterPro:Hydrolase_4	UniProt:I1JQM5
InterPro:IPR029058	EnsemblPlants:KRH68197	ProteinID:KRH68197	ProteinID:KRH68197.1	PFAM:PF12146	PRINTS:PR00111
PANTHER:PTHR11614	PANTHER:PTHR11614:SF120	SUPFAM:SSF53474	UniParc:UPI00023C1C91	:	:

Description

hypothetical protein

Coordinates

chr3:-:41944765..41948906

Molecular Weight (calculated)

39776.2 Da

IEP (calculated)

9.338

GRAVY (calculated)

-0.324

Length

348 amino acids

Sequence
(BLAST)

001: MVTYIWRLQH QEYRRNSRGV QLFTCKWLPF SSPKGLVFLC HGYGMECSGF MRECGVRLAC AKYAVFGMDY EGHGRSEGAR CYIKKFDNIV NDCYDFFKSV
101: SELQEYKAKA RFLYGESMGG AVSLLLHKKD PSFWDGAVLV APMCKISEKV KPHPVVVNIL TKVEDIIPKW KIVPTKDVID SAFKDPAKRE RIRKNKLIYQ
201: DKPRLKTALE MLRISMSLED SLYKVTLPFF VLHGEADTVT DPEVSRALYE RASSKDKTIK LYPGMWHGLT SGETDENIEK VFADIIMWLD KHTSNATHAS
301: SQQIETCNYG IERFTTVASS PKIVKQANGR RSYLCGLKGN RMLYHSAI

Best Arabidopsis Sequence Match ( AT3G62860.1 )
(BLAST)

001: MMKFKFQYEE EYIKNSRDVE LFACRWLPSS SPRALVFLCH GYGMECSSFM RECGIRLASA GYAVFGMDYE GHGRSKGARC YIKKFSNIVN DCFDYYTSIS
101: AQEEYKEKGR FLYGESMGGA VALLLHKKDP SFWNGALLVA PMCKISEKVK PHPVVINLLT RVEDIIPKWK IVPTKDVIDA AFKDPVKREE IRNNKLIYQD
201: KPRLKTALEM LRTSMDLEDT LHEITLPFFV LHGEADIVTD PEISKALFEK ASTRDKTIKL YPGMWHGLTS GEPDANVDLV FADIVNWLDA RTGDSASLTV
301: TPVHDFTSNV QKVVDGVSNG QGKSKRPQAS LLCGLNGGGR RLVHRSSM

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IZK0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.