CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH19112	Soybean	cytosol	91.29	80.37
VIT_09s0002g05730.t01	Wine grape	cytosol	74.56	66.67
Bra018986.1-P	Field mustard	cytosol	74.91	65.55
CDY62199	Canola	cytosol	74.56	65.24
CDY72184	Canola	cytosol	74.56	65.24
AT1G52760.1	Thale cress	cytosol	73.52	63.55
Solyc03g119980.2.1	Tomato	cytosol	71.08	62.39
PGSC0003DMT400014303	Potato	cytosol	70.38	61.77
CDY62163	Canola	plastid	44.95	59.17
Bra030364.1-P	Field mustard	plastid	44.95	59.17
GSMUA_Achr5P24890_001	Banana	cytoskeleton, cytosol, peroxisome	61.32	51.16
Os02t0207900-01	Rice	plasma membrane	57.84	48.4
GSMUA_Achr7P08420_001	Banana	cytosol	56.79	46.18
KRH20516	Soybean	cytosol	37.28	33.02
KRG93887	Soybean	cytosol	20.56	29.65
KRH48488	Soybean	cytosol	21.6	27.8
KRH69290	Soybean	cytosol	29.97	27.65
KRH68197	Soybean	cytosol	33.1	27.3
KRH18244	Soybean	cytosol	31.71	26.38
KRH34878	Soybean	cytosol	29.62	26.15
KRH39183	Soybean	cytosol	31.36	25.42
KRH60583	Soybean	peroxisome	24.39	24.65
KRG92965	Soybean	cytosol	27.87	24.46
KRH75362	Soybean	nucleus	31.71	23.1
KRH36216	Soybean	nucleus	27.53	22.77
KRG90831	Soybean	plastid	31.36	22.73
KRH35942	Soybean	plastid	30.31	22.72
KRH41883	Soybean	endoplasmic reticulum, golgi	27.18	21.67
KRH39013	Soybean	cytosol, mitochondrion, peroxisome, plastid	12.89	21.14
KRH62086	Soybean	plastid	26.48	20.11
KRH48707	Soybean	endoplasmic reticulum, golgi	26.13	19.84
KRH52771	Soybean	cytosol, endoplasmic reticulum, peroxisome	25.09	19.73

Protein Annotations

Gene3D:3.40.50.1820	MapMan:35.1	InterPro:AB_hydrolase	EMBL:ACUP02010323	EnsemblPlantsGene:GLYMA_17G058300	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020
GO:GO:0016298	GO:GO:0016787	InterPro:Hydrolase_4	UniProt:I1MSK5	InterPro:IPR029058	EnsemblPlants:KRH02768
ProteinID:KRH02768	ProteinID:KRH02768.1	PFAM:PF12146	PANTHER:PTHR11614	PANTHER:PTHR11614:SF90	SUPFAM:SSF53474
UniParc:UPI000294C54C	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:-:4425974..4426898

Molecular Weight (calculated)

32560.3 Da

IEP (calculated)

5.555

GRAVY (calculated)

-0.437

Length

287 amino acids

Sequence
(BLAST)

001: MAQESEVHPN FWGHTPEEEY YTSQGVRNTK SHFETPNGKI FTQSFFPLNL EPHEVKATVF MTHGYGSDTG WLFQKICINF STWGYAVFAA DLLGHGRSDG
101: LRCYLGDMDK IAATSLSFFL HVRNSEPYKN LPAFLLGESM GGLATLLMYF KSEPNTWTGL MFSAPLFVIP DDMKPSRVHL FIETEQETVR ELLRVTQYVQ
201: DNFSKVTAPF FTAHGTSDGV TCPSSSRLLY EKGSSEDKSL KLYDGMYHSL IQGEPDESAN LVLGDMREWI DERVRRYGPN KNPQSNN

Best Arabidopsis Sequence Match ( AT1G52760.1 )
(BLAST)

001: MPSEAESSAN SAPATPPPPP NFWGTMPEEE YYTSQGVRNS KSYFETPNGK LFTQSFLPLD GEIKGTVYMS HGYGSDTSWM FQKICMSFSS WGYAVFAADL
101: LGHGRSDGIR CYMGDMEKVA ATSLAFFKHV RCSDPYKDLP AFLFGESMGG LVTLLMYFQS EPETWTGLMF SAPLFVIPED MKPSKAHLFA YGLLFGLADT
201: WAAMPDNKMV GKAIKDPEKL KIIASNPQRY TGKPRVGTMR ELLRKTQYVQ ENFGKVTIPV FTAHGTADGV TCPTSSKLLY EKASSADKTL KIYEGMYHSL
301: IQGEPDENAE IVLKDMREWI DEKVKKYGSK TA

Arabidopsis Description

CSECaffeoylshikimate esterase [Source:UniProtKB/Swiss-Prot;Acc:Q9C942]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.