Factsheet for Solyc03g119980.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400014303	Potato	cytosol	97.55	97.55
VIT_09s0002g05730.t01	Wine grape	cytosol	78.59	80.06
Bra018986.1-P	Field mustard	cytosol	80.12	79.88
CDY72184	Canola	cytosol	80.12	79.88
CDY62199	Canola	cytosol	80.12	79.88
KRH19112	Soybean	cytosol	77.68	77.91
AT1G52760.1	Thale cress	cytosol	78.59	77.41
KRH02768	Soybean	cytosol	62.39	71.08
CDY62163	Canola	plastid	46.48	69.72
Bra030364.1-P	Field mustard	plastid	46.48	69.72
GSMUA_Achr5P24890_001	Banana	cytoskeleton, cytosol, peroxisome	68.5	65.12
Os02t0207900-01	Rice	plasma membrane	62.08	59.18
GSMUA_Achr7P08420_001	Banana	cytosol	60.86	56.37
Solyc03g006560.2.1	Tomato	cytosol	37.31	41.5
Solyc04g010250.2.1	Tomato	cytosol	31.5	32.29
Solyc02g069930.1.1	Tomato	cytosol	30.28	31.03
Solyc09g075140.2.1	Tomato	cytosol	33.33	30.97
Solyc02g063160.2.1	Tomato	cytosol	32.11	30.7
Solyc05g056000.2.1	Tomato	cytosol	30.89	30.15
Solyc02g086040.1.1	Tomato	cytosol	22.02	25.53
Solyc05g009390.2.1	Tomato	plastid	30.58	25.19
Solyc02g063200.1.1	Tomato	cytosol	22.94	21.61
Solyc08g066440.2.1	Tomato	cytosol, endoplasmic reticulum, plastid	25.69	20.79
Solyc03g098020.2.1	Tomato	plastid	25.08	20.1

Protein Annotations

MapMan:21.6.1.3	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	GO:GO:0003674	GO:GO:0003824	GO:GO:0003846
GO:GO:0004622	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783
GO:GO:0005794	GO:GO:0005886	GO:GO:0006629	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150
GO:GO:0008152	GO:GO:0009506	GO:GO:0010043	GO:GO:0016020	GO:GO:0016298	GO:GO:0016740
GO:GO:0016787	GO:GO:0042542	GO:GO:0046686	GO:GO:0090430	InterPro:Hydrolase_4	InterPro:IPR029058
UniProt:K4BME7	PFAM:PF12146	PANTHER:PTHR11614	PANTHER:PTHR11614:SF90	SUPFAM:SSF53474	EnsemblPlantsGene:Solyc03g119980.2
EnsemblPlants:Solyc03g119980.2.1	UniParc:UPI000276699F	:	:	:	:

Description

Caffeoylshikimate esterase [Source:Projected from Arabidopsis thaliana (AT1G52760) UniProtKB/Swiss-Prot;Acc:Q9C942]

Coordinates

chr3:-:68491760..68494252

Molecular Weight (calculated)

36294.2 Da

IEP (calculated)

6.254

GRAVY (calculated)

-0.258

Length

327 amino acids

Sequence
(BLAST)

001: MASEAPATAV NYWGDMPEEE YYASQGVRNS KSYFDTPNGK LFTQSFLPLD PNVSPKATVY MTHGYGSDTG WLFQKICISY ASWGYAVFAA DLLGHGRSDG
101: IRCYAGDLEK TAATSLCFFK SVRNSDEYKH LPAFLFGESM GGLATLLMYL QSEPDTWTGL IFSAPLFVIP EPMKPSKVHL FMYGLLFGFA DTWAAMPDNK
201: MVGKAIRDPE KLKIIASNPR RYTGKPRVGT MREIARQCEY VQNNFDKVTA PFLTAHGTSD GLACPTGSKL LYEKASSEDK TLKIYDGMYH SLIQGEPDDA
301: VAIVLADMRA WIDERVERYG PKINGSA

Best Arabidopsis Sequence Match ( AT1G52760.1 )
(BLAST)

001: MPSEAESSAN SAPATPPPPP NFWGTMPEEE YYTSQGVRNS KSYFETPNGK LFTQSFLPLD GEIKGTVYMS HGYGSDTSWM FQKICMSFSS WGYAVFAADL
101: LGHGRSDGIR CYMGDMEKVA ATSLAFFKHV RCSDPYKDLP AFLFGESMGG LVTLLMYFQS EPETWTGLMF SAPLFVIPED MKPSKAHLFA YGLLFGLADT
201: WAAMPDNKMV GKAIKDPEKL KIIASNPQRY TGKPRVGTMR ELLRKTQYVQ ENFGKVTIPV FTAHGTADGV TCPTSSKLLY EKASSADKTL KIYEGMYHSL
301: IQGEPDENAE IVLKDMREWI DEKVKKYGSK TA

Arabidopsis Description

CSECaffeoylshikimate esterase [Source:UniProtKB/Swiss-Prot;Acc:Q9C942]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.