Factsheet for Solyc05g056000.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400060321	Potato	cytosol	95.52	95.52
VIT_13s0019g04260.t01	Wine grape	cytosol	72.54	73.86
KRH34878	Soybean	cytosol	69.25	71.38
AT5G19290.1	Thale cress	cytoskeleton, cytosol, plastid	68.06	69.09
Bra020032.1-P	Field mustard	cytosol	68.06	68.06
CDY44908	Canola	cytosol	68.06	68.06
CDY69863	Canola	cytosol	68.06	68.06
Bra002224.1-P	Field mustard	cytosol	67.16	67.16
CDY13986	Canola	cytosol	67.16	67.16
GSMUA_Achr1P08950_001	Banana	peroxisome	65.97	66.77
CDX92543	Canola	cytosol	67.16	66.37
AT5G14980.1	Thale cress	plastid	64.78	66.36
CDX85571	Canola	plastid	64.78	66.16
TraesCS4B01G051000.1	Wheat	cytosol	61.49	63.19
TraesCS4A01G263500.1	Wheat	cytosol	60.3	62.15
TraesCS4D01G051100.1	Wheat	cytosol, golgi	60.0	61.85
Os01t0317800-01	Rice	plasma membrane	59.7	60.79
Zm00001d040681_P001	Maize	cytosol, mitochondrion	59.4	60.67
EES00674	Sorghum	cytosol	58.21	59.09
Solyc02g069930.1.1	Tomato	cytosol	44.78	47.02
Solyc03g006560.2.1	Tomato	cytosol	35.22	40.14
Solyc04g010250.2.1	Tomato	cytosol	34.93	36.68
Solyc09g075140.2.1	Tomato	cytosol	34.63	32.95
Solyc03g119980.2.1	Tomato	cytosol	30.15	30.89
Solyc02g063160.2.1	Tomato	cytosol	28.96	28.36
Solyc05g009390.2.1	Tomato	plastid	31.94	26.95
Solyc02g086040.1.1	Tomato	cytosol	22.09	26.24
Solyc02g063200.1.1	Tomato	cytosol	22.99	22.19
Solyc03g098020.2.1	Tomato	plastid	25.97	21.32
Solyc08g066440.2.1	Tomato	cytosol, endoplasmic reticulum, plastid	23.58	19.55

Protein Annotations

EnsemblPlants:Solyc05g056000.2.1	EnsemblPlantsGene:Solyc05g056000.2	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016298	GO:GO:0016787
InterPro:AB_hydrolase	InterPro:Hydrolase_4	InterPro:IPR029058	PANTHER:PTHR11614	PANTHER:PTHR11614:SF101	PFAM:PF12146
SUPFAM:SSF53474	UniParc:UPI000276744E	UniProt:K4C2S5	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr5:+:65396461..65398412

Molecular Weight (calculated)

37159.8 Da

IEP (calculated)

6.700

GRAVY (calculated)

-0.016

Length

335 amino acids

Sequence
(BLAST)

001: MKHPVAEANE LSPFGTLSQS EFYSHHSVTH NSEFITNSRG LKLFTQWWSP LPPTKIIGVV CVVHGFTGES SWFVQLTAVH IAKNGFIVCA IDHQGHGFSD
101: GLIAHIPDLN LVVDDCISFF DSFRDLHVPP SLPSFLYAES LGGAIALLIT LREGDSAPRR SFDGVVLNGA MYGISNKFKP PWPLEHLLGI AAVLIPTWPV
201: VPTRGSLPLV AFKEEWKRKL AIASPRRPLI KPRPATAREL MRVCRELQGR FEEVKVPFLI VHGSDDVICD PACAEELYRR STSKDKTLKI YPGMWHQLVG
301: ELEENVEQVF GDVVEWLKMR ADVSTGDKAT VDGGA

Best Arabidopsis Sequence Match ( AT5G19290.1 )
(BLAST)

001: MGLHPISDAN EHNPFGSLTA DEFYAKHSVS HSSAFITNPR GLKLFTQWWS PLPPTKPIGI IAVVHGFTGE SSWFLQLTSI LFAKSGFITC AIDHQGHGFS
101: DGLIAHIPDI NPVVDDCISF FDDFRSRQTP SDLPCFLYSE SLGGAIALYI SLRQRGVWDG LILNGAMCGI SDKFKPPWPL EHLLFVVANL IPTWRVIPTR
201: GSIPDVSFKE PWKRKLAMAS PRRTVAKPRA ATAYELIRVC KDLQGRFEEV EVPLLIVHGG GDVVCDVACV EELHRRAISE DKTIKIYPEL WHQMIGESEE
301: KVDLVYGDML SWLKSRAERK ARAAVDGGAA

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8VZV6]
SUBAcon: [plastid,cytoskeleton,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.