Factsheet for Bra020032.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
EpiLoc:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY44908	Canola	cytosol	99.4	99.4
CDY69863	Canola	cytosol	97.91	97.91
Bra002224.1-P	Field mustard	cytosol	91.34	91.34
AT5G19290.1	Thale cress	cytoskeleton, cytosol, plastid	89.85	91.21
KRH34878	Soybean	cytosol	72.84	75.08
VIT_13s0019g04260.t01	Wine grape	cytosol	68.96	70.21
GSMUA_Achr1P08950_001	Banana	peroxisome	67.46	68.28
Solyc05g056000.2.1	Tomato	cytosol	68.06	68.06
PGSC0003DMT400060321	Potato	cytosol	67.16	67.16
Zm00001d040681_P001	Maize	cytosol, mitochondrion	62.39	63.72
TraesCS4B01G051000.1	Wheat	cytosol	61.79	63.5
Os01t0317800-01	Rice	plasma membrane	62.09	63.22
TraesCS4A01G263500.1	Wheat	cytosol	61.19	63.08
TraesCS4D01G051100.1	Wheat	cytosol, golgi	61.19	63.08
EES00674	Sorghum	cytosol	60.9	61.82
Bra041073.1-P	Field mustard	cytosol	37.31	38.94
Bra000132.1-P	Field mustard	mitochondrion	33.43	36.6
Bra017076.1-P	Field mustard	cytosol	32.54	34.38
Bra007148.1-P	Field mustard	cytosol	29.25	33.79
Bra017077.1-P	Field mustard	cytosol	30.15	32.48
Bra014388.1-P	Field mustard	cytosol	27.16	30.03
Bra030364.1-P	Field mustard	plastid	18.81	28.9
Bra018986.1-P	Field mustard	cytosol	28.06	28.66
Bra008307.1-P	Field mustard	cytosol, plastid	30.45	26.7
Bra003685.1-P	Field mustard	cytosol	14.93	26.32
Bra008644.1-P	Field mustard	cytosol	25.97	26.28
Bra021437.1-P	Field mustard	cytosol	23.28	25.41
Bra003843.1-P	Field mustard	golgi, vacuole	25.97	22.77
Bra015989.1-P	Field mustard	plastid	27.16	22.36
Bra016558.1-P	Field mustard	cytosol, nucleus, plastid	24.48	20.92
Bra008947.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	23.88	20.51
Bra007707.1-P	Field mustard	cytosol	30.45	18.18
Bra023553.1-P	Field mustard	cytosol	27.46	16.61
Bra000456.1-P	Field mustard	nucleus	30.75	12.26

Protein Annotations

EnsemblPlants:Bra020032.1	EnsemblPlants:Bra020032.1-P	EnsemblPlantsGene:Bra020032	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:Hydrolase_4
InterPro:IPR029058	PANTHER:PTHR11614	PANTHER:PTHR11614:SF101	PFAM:PF12146	SEG:seg	SUPFAM:SSF53474
UniParc:UPI0002543274	UniProt:M4DU39	MapMan:35.1	:	:	:

Description

AT5G19290 (E=5e-170) | esterase/lipase/thioesterase family protein

Coordinates

chrA02:+:4726829..4727836

Molecular Weight (calculated)

37283.6 Da

IEP (calculated)

6.181

GRAVY (calculated)

-0.081

Length

335 amino acids

Sequence
(BLAST)

001: MGLHPIADAD ERNPFGSLSA DEFYAKHSVS HSSAFITNPR GLKLFTQWWS PLPPTPPIGI VAVVYGFTGE SSWFLQLTSI LFAKSGFITC AIDHQGHGFS
101: DGLVAHIPDI NPVVDDCISF FDDFRSRQET PDLPCFLYSE SLGGAIALYV SLRQRGVWDG LILNGAMCGI SRKFKPPWPL EHLLFVVANL IPTWRVIPTR
201: GSIPDVSFKE PWKRKLALAS PRRTVARPRA ATAYELIRIC NELQERFEEV EVPLLIVHGG GDVVCDPACV EELHRRAASE DKTIKIYPEM WHQMVGESEE
301: NVDLVYGDIL NWLKSRAESA AERKRLGRAA VDGGA

Best Arabidopsis Sequence Match ( AT5G19290.1 )
(BLAST)

001: MGLHPISDAN EHNPFGSLTA DEFYAKHSVS HSSAFITNPR GLKLFTQWWS PLPPTKPIGI IAVVHGFTGE SSWFLQLTSI LFAKSGFITC AIDHQGHGFS
101: DGLIAHIPDI NPVVDDCISF FDDFRSRQTP SDLPCFLYSE SLGGAIALYI SLRQRGVWDG LILNGAMCGI SDKFKPPWPL EHLLFVVANL IPTWRVIPTR
201: GSIPDVSFKE PWKRKLAMAS PRRTVAKPRA ATAYELIRVC KDLQGRFEEV EVPLLIVHGG GDVVCDVACV EELHRRAISE DKTIKIYPEL WHQMIGESEE
301: KVDLVYGDML SWLKSRAERK ARAAVDGGAA

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8VZV6]
SUBAcon: [cytosol,cytoskeleton,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.