Factsheet for Bra016558.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83852	Canola	plastid	72.7	75.2
CDX96722	Canola	plastid	72.7	73.45
AT1G18360.1	Thale cress	mitochondrion, plastid	67.09	68.85
Bra003843.1-P	Field mustard	golgi, vacuole	61.48	63.09
KRH60583	Soybean	peroxisome	44.9	61.97
GSMUA_Achr10P...	Banana	extracellular	37.5	58.1
KRH39013	Soybean	cytosol, mitochondrion, peroxisome, plastid	25.77	57.71
Bra015989.1-P	Field mustard	plastid	59.69	57.49
KRH41883	Soybean	endoplasmic reticulum, golgi	50.26	54.72
VIT_17s0000g01010.t01	Wine grape	plastid	53.32	52.25
VIT_17s0000g01070.t01	Wine grape	plastid	52.3	51.38
KRH48707	Soybean	endoplasmic reticulum, golgi	48.47	50.26
Solyc03g098020.2.1	Tomato	plastid	52.3	50.25
PGSC0003DMT400083974	Potato	plastid	52.04	50.0
TraesCS5A01G202900.1	Wheat	mitochondrion, plastid	48.47	48.72
TraesCS5B01G201400.1	Wheat	mitochondrion, plastid	48.47	48.72
TraesCS5D01G209300.2	Wheat	mitochondrion, plastid	48.47	48.47
Os09t0394700-01	Rice	plastid	47.96	47.36
EER98863	Sorghum	plastid	48.21	46.21
Zm00001d020380_P002	Maize	plastid	48.47	45.67
Os03t0719400-01	Rice	endoplasmic reticulum, golgi	45.66	45.66
EER90977	Sorghum	endoplasmic reticulum, golgi, plastid	45.66	45.66
Zm00001d033797_P002	Maize	endoplasmic reticulum, golgi	45.66	45.43
HORVU4Hr1G008550.3	Barley	endoplasmic reticulum, golgi	44.13	45.41
Zm00001d013406_P002	Maize	endoplasmic reticulum, golgi, mitochondrion	44.64	44.99
TraesCS4A01G263200.1	Wheat	endoplasmic reticulum, golgi	43.37	44.5
TraesCS4D01G051900.2	Wheat	endoplasmic reticulum, golgi	43.37	44.39
TraesCS4B01G051600.1	Wheat	endoplasmic reticulum, golgi	43.37	44.27
Bra008947.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	42.86	43.08
Bra041073.1-P	Field mustard	cytosol	25.51	31.15
Bra000132.1-P	Field mustard	mitochondrion	23.47	30.07
Bra017077.1-P	Field mustard	cytosol	22.7	28.62
Bra017076.1-P	Field mustard	cytosol	22.96	28.39
Bra007148.1-P	Field mustard	cytosol	20.92	28.28
Bra030364.1-P	Field mustard	plastid	15.05	27.06
Bra018986.1-P	Field mustard	cytosol	20.92	25.0
Bra008644.1-P	Field mustard	cytosol	20.92	24.77
Bra020032.1-P	Field mustard	cytosol	20.92	24.48
Bra002224.1-P	Field mustard	cytosol	20.66	24.18
Bra014388.1-P	Field mustard	cytosol	18.62	24.09
Bra003685.1-P	Field mustard	cytosol	10.71	22.11
Bra021437.1-P	Field mustard	cytosol	16.84	21.5
Bra008307.1-P	Field mustard	cytosol, plastid	19.64	20.16
Bra023553.1-P	Field mustard	cytosol	21.94	15.52
Bra007707.1-P	Field mustard	cytosol	20.41	14.26
Bra000456.1-P	Field mustard	nucleus	21.43	10.0

Protein Annotations

Gene3D:3.40.50.1820	Gene3D:3.40.50.410	MapMan:35.1	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	EnsemblPlantsGene:Bra016558
EnsemblPlants:Bra016558.1	EnsemblPlants:Bra016558.1-P	GO:GO:0000439	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006259	GO:GO:0006289
GO:GO:0006355	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016787	GO:GO:0047372	InterPro:Hydrolase_4	InterPro:IPR029058	InterPro:IPR036465	UniProt:M4DJ80
PFAM:PF03850	PFAM:PF12146	PRINTS:PR00111	PANTHER:PTHR11614	PANTHER:PTHR11614:SF114	SUPFAM:SSF53474
InterPro:TFIIH_Tfb4/GTF2H3	UniParc:UPI00025470F7	SEG:seg	InterPro:vWFA_dom_sf	:	:

Description

AT1G18360 (E=6e-149) | hydrolase, alpha/beta fold family protein

Coordinates

chrA08:+:19057963..19063200

Molecular Weight (calculated)

42683.9 Da

IEP (calculated)

6.179

GRAVY (calculated)

0.011

Length

392 amino acids

Sequence
(BLAST)

001: MRRVLEDNGG DGSSVRDFSF FTTERGDTLF TQSWTRVGSV KNRGLVVLLH GLNEHSGRYS DFAKQLNVNG FKVYGLDWIG HGGSDGLHAY VPSLDYAVTD
101: LSSFLEKVIA ENPGLPCFCV GHSTGGAIIL KAMLDPKIES QVSGIVLTSP AVGVQPSHPI FGVIAPFLAF LIPRYQLSAA KKKIMPVSRD PEALLAKYSD
201: PLVYTGFIRA RTGYEILRLG SHLLENLTRI KVPFLVLHGT ADTVTDPKAT QRLYDEASSS DKSIKLFDGL LHDLLFEPER GIIADDVSLL VLLLDTNPFF
301: WDTTSTTFSQ FLSHVLAFLN AVLGLNQLNQ VVVIATGYSS CDYVYDSSLT SNILCLQGSP DGPEQSVFGQ SKLDGANASS SVNDRKRKAP DS

Best Arabidopsis Sequence Match ( AT1G18360.1 )
(BLAST)

001: MICSSKGTVV IATRSSFPRL LNRIQNRNDV PISVIATRRS SMSVEAFPMR LKSSQKKRKM NIGCGVSPSS PTTTVVDEEV AIRRKLAMRR VLEDNGGDGS
101: SVRDFSLFTT KRGDTLFTQS WTPVDSAKNR GLVVLLHGLN EHSGRYSDFA KQLNVNGFKV YGIDWIGHGG SDGLHAYVPS LDYAVADLKS FIEKVIAENP
201: GLPCFCIGHS TGGAIILKAM LDAKIEARVS GIVLTSPAVG VQPTYPIFGV IAPFLSFLIP RYQLSAAKKK IMPVSRDPEA LLAKYSDPLV YTGFIRARTG
301: NEILRLGAHL LQNLNRIKVP FLVMHGTADT VTDPKGTQKL YNEASSSDKS IKLYDGLLHD LLFEPERETI AGVILDWLNR RV

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8VYJ0]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.