Factsheet for Bra008947.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, plastid, cytosol

Predictor Summary:

plastid 5
endoplasmic reticulum 1
cytosol 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69743	Canola	cytosol, endoplasmic reticulum, golgi, plastid	99.49	99.49
AT5G11650.1	Thale cress	plastid	91.79	91.79
GSMUA_Achr10P...	Banana	cytosol	59.49	77.59
KRH62086	Soybean	plastid	71.79	74.07
KRH52771	Soybean	cytosol, endoplasmic reticulum, peroxisome	68.97	73.7
VIT_04s0008g03220.t01	Wine grape	cytosol	69.49	67.92
GSMUA_Achr8P20130_001	Banana	plastid	63.85	66.76
PGSC0003DMT400011430	Potato	cytosol	68.21	65.84
Solyc08g066440.2.1	Tomato	cytosol, endoplasmic reticulum, plastid	67.95	65.59
TraesCS3B01G222200.1	Wheat	endoplasmic reticulum, plasma membrane	28.97	64.94
GSMUA_Achr7P13720_001	Banana	plastid	64.62	63.32
TraesCS3A01G312100.1	Wheat	cytosol	61.54	61.7
TraesCS3B01G160100.1	Wheat	cytosol	61.28	61.44
Os01t0199400-01	Rice	cytosol, endoplasmic reticulum, peroxisome	62.05	61.27
TraesCS3D01G142300.1	Wheat	cytosol	61.03	61.18
EES00118	Sorghum	cytosol, nucleus, plastid, vacuole	63.33	61.14
Zm00001d039416_P001	Maize	cytosol	62.31	60.75
HORVU3Hr1G027160.1	Barley	golgi, mitochondrion	60.77	58.09
GSMUA_AchrUn_...	Banana	mitochondrion	61.54	55.56
Bra003843.1-P	Field mustard	golgi, vacuole	48.46	49.48
Bra015989.1-P	Field mustard	plastid	48.72	46.68
Bra016558.1-P	Field mustard	cytosol, nucleus, plastid	43.08	42.86
Bra041073.1-P	Field mustard	cytosol	26.67	32.4
Bra000132.1-P	Field mustard	mitochondrion	25.38	32.35
Bra017076.1-P	Field mustard	cytosol	25.9	31.86
Bra007148.1-P	Field mustard	cytosol	22.56	30.34
Bra017077.1-P	Field mustard	cytosol	23.85	29.9
Bra030364.1-P	Field mustard	plastid	16.41	29.36
Bra008644.1-P	Field mustard	cytosol	24.1	28.4
Bra018986.1-P	Field mustard	cytosol	22.82	27.13
Bra014388.1-P	Field mustard	cytosol	19.74	25.41
Bra008307.1-P	Field mustard	cytosol, plastid	24.62	25.13
Bra020032.1-P	Field mustard	cytosol	20.51	23.88
Bra002224.1-P	Field mustard	cytosol	20.51	23.88
Bra021437.1-P	Field mustard	cytosol	16.67	21.17
Bra003685.1-P	Field mustard	cytosol	10.26	21.05
Bra023553.1-P	Field mustard	cytosol	24.1	16.97
Bra007707.1-P	Field mustard	cytosol	22.56	15.69
Bra000456.1-P	Field mustard	nucleus	22.82	10.6

Protein Annotations

Gene3D:3.40.50.1820	MapMan:35.1	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	EnsemblPlantsGene:Bra008947	EnsemblPlants:Bra008947.1
EnsemblPlants:Bra008947.1-P	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783
GO:GO:0005794	GO:GO:0016020	GO:GO:0016021	InterPro:Hydrolase_4	InterPro:IPR029058	UniProt:M4CXK0
PFAM:PF12146	PRINTS:PR00111	PANTHER:PTHR11614	PANTHER:PTHR11614:SF143	SUPFAM:SSF53474	TMHMM:TMhelix
UniParc:UPI0002544111	SEG:seg	:	:	:	:

Description

AT5G11650 (E=4e-184) | hydrolase, alpha/beta fold family protein

Coordinates

chrA10:-:14544087..14545788

Molecular Weight (calculated)

43400.6 Da

IEP (calculated)

9.579

GRAVY (calculated)

-0.042

Length

390 amino acids

Sequence
(BLAST)

001: MASTSAEIEQ LTSGASNRII PILKTLRKCF IFVLSLFLSL LLLLRPRRRV LPLPSPEEEA GPAAPSRRWR RKMAWKLEEE DTARRRSLAE GVEIGEIDSR
101: WSSFLFYGRR GNALFSRSWL PLSGELRGIL IIIHGLNEHS GRYSQFAKQL NTSNFGVYAM DWIGHGGSDG LHGYVPSLDY VVSDTVAFLE KIRSENPGVP
201: CFLFGHSTGG AVVLKAALSP SIEDMLAGIV LTSPALRVKP AHPIVGAIAP IFSLVAPRFQ FKGANKRGIP VSRDPEALLA KYSDPLVYTG PIRVRTGHEI
301: LRITAYLTRN FKSITVPFFV LHGTEDKVTD PLASQDLYNQ APSVFKDIKL YEGFLHDLLF EPEREEVGRD IIGWMMKRLD DVNGSAAGLW

Best Arabidopsis Sequence Match ( AT5G11650.1 )
(BLAST)

001: MASTSAEMDQ LTSGASNRII FILRTLRKCL VFVLSLVLSL LLILRLRPRR RVSPLSSPED EAVPAPSRRW RRKMAWKLEE EDTARRRSLA EGVEMAGDGE
101: ISCSLFYGRR GNALFSRSWL PISGELRGIL IIIHGLNEHS GRYSQFAKQL NASNLGVYAM DWIGHGGSDG LHGYVPSLDY VVSDTEAFLE KIRSENPGVP
201: CFLFGHSTGG AVVLKAASSP SIEDMLAGIV LTSPALRVKP AHPIVGAIAP IFSLLAPRFQ FKGANKRGIP VSRDPEALLA KYSDPLVYTG PIRVRTGYEI
301: LRITAYLTRN FKSVTVPFFV LHGTEDKVTD PLASQDLYNQ APSVFKDIKL YDGFLHDLLF EPEREEVGRD IIDWMMNRLD DVNGSAASLW

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LYG5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.