Factsheet for Bra003843.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68225	Canola	mitochondrion	99.48	81.72
CDY11104	Canola	plastid	98.43	81.39
Bra015989.1-P	Field mustard	plastid	86.39	81.08
AT1G73480.1	Thale cress	mitochondrion, plastid	90.31	74.51
KRH60583	Soybean	peroxisome	48.43	65.14
KRH39013	Soybean	cytosol, mitochondrion, peroxisome, plastid	29.32	64.0
VIT_17s0000g01010.t01	Wine grape	plastid	65.18	62.25
Bra016558.1-P	Field mustard	cytosol, nucleus, plastid	63.09	61.48
PGSC0003DMT400083974	Potato	plastid	65.44	61.27
KRH48707	Soybean	endoplasmic reticulum, golgi	59.95	60.58
Solyc03g098020.2.1	Tomato	plastid	64.66	60.54
GSMUA_Achr10P...	Banana	extracellular	40.05	60.47
VIT_17s0000g01070.t01	Wine grape	plastid	63.09	60.4
KRH41883	Soybean	endoplasmic reticulum, golgi	56.54	60.0
Os03t0719400-01	Rice	endoplasmic reticulum, golgi	54.71	53.32
TraesCS4D01G051900.2	Wheat	endoplasmic reticulum, golgi	52.88	52.74
TraesCS4A01G263200.1	Wheat	endoplasmic reticulum, golgi	52.62	52.62
TraesCS4B01G051600.1	Wheat	endoplasmic reticulum, golgi	52.88	52.6
TraesCS5A01G202900.1	Wheat	mitochondrion, plastid	53.66	52.56
EER90977	Sorghum	endoplasmic reticulum, golgi, plastid	53.93	52.55
TraesCS5B01G201400.1	Wheat	mitochondrion, plastid	53.4	52.31
TraesCS5D01G209300.2	Wheat	mitochondrion, plastid	53.4	52.04
Zm00001d033797_P002	Maize	endoplasmic reticulum, golgi	53.66	52.03
HORVU4Hr1G008550.3	Barley	endoplasmic reticulum, golgi	51.83	51.97
Zm00001d013406_P002	Maize	endoplasmic reticulum, golgi, mitochondrion	52.88	51.93
Os09t0394700-01	Rice	plastid	53.66	51.64
EER98863	Sorghum	plastid	55.24	51.59
Zm00001d020380_P002	Maize	plastid	54.71	50.24
Bra008947.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	49.48	48.46
Bra041073.1-P	Field mustard	cytosol	27.23	32.4
Bra000132.1-P	Field mustard	mitochondrion	24.87	31.05
Bra007148.1-P	Field mustard	cytosol	23.3	30.69
Bra017076.1-P	Field mustard	cytosol	25.13	30.28
Bra017077.1-P	Field mustard	cytosol	23.82	29.26
Bra008644.1-P	Field mustard	cytosol	23.82	27.49
Bra030364.1-P	Field mustard	plastid	15.45	27.06
Bra020032.1-P	Field mustard	cytosol	22.77	25.97
Bra002224.1-P	Field mustard	cytosol	22.51	25.67
Bra018986.1-P	Field mustard	cytosol	21.99	25.61
Bra014388.1-P	Field mustard	cytosol	19.63	24.75
Bra008307.1-P	Field mustard	cytosol, plastid	24.61	24.61
Bra003685.1-P	Field mustard	cytosol	11.78	23.68
Bra021437.1-P	Field mustard	cytosol	17.8	22.15
Bra023553.1-P	Field mustard	cytosol	25.39	17.51
Bra007707.1-P	Field mustard	cytosol	23.3	15.86
Bra000456.1-P	Field mustard	nucleus	23.3	10.6

Protein Annotations

EnsemblPlants:Bra003843.1	EnsemblPlants:Bra003843.1-P	EnsemblPlantsGene:Bra003843	Gene3D:3.40.50.1820	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:AB_hydrolase	InterPro:Hydrolase_4	InterPro:IPR029058	PANTHER:PTHR11614	PANTHER:PTHR11614:SF114
PFAM:PF12146	SEG:seg	SUPFAM:SSF53474	TMHMM:TMhelix	UniParc:UPI000254172A	UniProt:M4CI10
MapMan:35.1	:	:	:	:	:

Description

AT1G73480 (E=5e-192) | hydrolase, alpha/beta fold family protein

Coordinates

chrA07:-:15320367..15322942

Molecular Weight (calculated)

42165.2 Da

IEP (calculated)

9.475

GRAVY (calculated)

0.010

Length

382 amino acids

Sequence
(BLAST)

001: MRELKRLVTI IHALILFILL PFRVVVWRRR TGAVVIRDEK QERKVWSPPQ IVVRKRGAGG SESGCSVAPP SVPAAVVDLE VAVRRELAMR RVLEDDGGDG
101: SSVREFSLFP TKRGDTLFTQ SWSPVSPNHR GLIVLLHGLN EHSGRYSDFA KQLNANGFKV YGIDWIGHGG SDGLHAYVPS LDYAVEDLKS FLEKVFTENP
201: GLPCFCIGHS TGGAIILKAM LDPMIESRVS GIVLTSPAVG VQPSHPIFTV LAPIVAFLLP RYQFSAANKK GMPVSRDPQA LVTKYSDPLV FTGSIRVKTG
301: YEILRIAAHL QQNLNKVKVP FLVMHGTADT VTDPNASKRL YEEASSSDKS IKLFDGLLHD LLFEPEREII AGVILDWLNQ RV

Best Arabidopsis Sequence Match ( AT1G73480.1 )
(BLAST)

001: MICSSKGTIL IARGKNSNTI PRLPLKGSST NYANRIQIRN PISVKTFRRS SSSSMAVETM SMGSDSSTLI LTSGASGRVR VLFSMRELKR LVTIIQSLIL
101: FLLLPFRVVV WRRRTGAVVI RDDKQERKVW SPPQIVVRKR NIGGESSVSP PSVPAAVVDG EVAVRRELAI KRVLEDEGGD GSSVRDYSLF TTKRGDTLFS
201: QSWSPLSPNH RGLIVLLHGL NEHSGRYSDF AKQLNANGFK VYGIDWIGHG GSDGLHAYVP SLDYAVTDLK SFLEKVFTEN PGLPCFCFGH STGGAIILKA
301: MLDPKIESRV SGIALTSPAV GVQPSHPIFA VLAPIMAFLL PRYQISAANK KGMPVSRDPA ALIAKYSDPL VFTGSIRVKT GYEILRITAH LQQNLNKVKV
401: PFLVMHGTDD TVTDPSASKK LYEEAASSDK SLKLYDGLLH DLLFEPEREI IAGAILDWLN QRV

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q94AM5]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.