Factsheet for Bra008307.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

plastid 3
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40888	Canola	plastid	97.38	97.38
CDY38348	Canola	plastid	97.12	96.87
CDY40890	Canola	plastid	97.12	96.87
AT1G77420.1	Thale cress	cytosol	85.86	85.86
Bra003685.1-P	Field mustard	cytosol	34.29	68.95
KRH75362	Soybean	nucleus	61.52	59.64
VIT_01s0011g03620.t01	Wine grape	cytosol, plastid	63.87	58.51
GSMUA_Achr3P29490_001	Banana	plastid	57.59	58.2
PGSC0003DMT400037702	Potato	cytosol	60.21	57.93
Solyc05g009390.2.1	Tomato	plastid	59.95	57.68
TraesCS3D01G263200.2	Wheat	mitochondrion	56.02	56.91
TraesCS3A01G263400.1	Wheat	mitochondrion, plastid	56.02	56.91
TraesCS3B01G296600.2	Wheat	plastid	55.5	56.38
HORVU3Hr1G063840.1	Barley	mitochondrion, plastid	55.5	56.38
Os01t0688200-01	Rice	plastid	56.81	56.22
GSMUA_Achr4P03690_001	Banana	mitochondrion	55.76	55.76
KXG33155	Sorghum	plastid	53.66	55.71
Zm00001d011619_P002	Maize	plastid	56.02	53.37
Bra008644.1-P	Field mustard	cytosol	45.55	52.57
Bra000132.1-P	Field mustard	mitochondrion	32.46	40.52
Bra017076.1-P	Field mustard	cytosol	31.94	38.49
Bra041073.1-P	Field mustard	cytosol	30.63	36.45
Bra007148.1-P	Field mustard	cytosol	27.23	35.86
Bra017077.1-P	Field mustard	cytosol	28.53	35.05
Bra014388.1-P	Field mustard	cytosol	26.44	33.33
Bra018986.1-P	Field mustard	cytosol	26.96	31.4
Bra023553.1-P	Field mustard	cytosol	45.03	31.05
Bra002224.1-P	Field mustard	cytosol	27.23	31.04
Bra020032.1-P	Field mustard	cytosol	26.7	30.45
Bra030364.1-P	Field mustard	plastid	16.23	28.44
Bra021437.1-P	Field mustard	cytosol	21.73	27.04
Bra008947.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	25.13	24.62
Bra003843.1-P	Field mustard	golgi, vacuole	24.61	24.61
Bra015989.1-P	Field mustard	plastid	24.08	22.6
Bra007707.1-P	Field mustard	cytosol	30.89	21.03
Bra016558.1-P	Field mustard	cytosol, nucleus, plastid	20.16	19.64
Bra000456.1-P	Field mustard	nucleus	31.41	14.29

Protein Annotations

Gene3D:3.40.50.1820	MapMan:35.1	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	EnsemblPlantsGene:Bra008307	EnsemblPlants:Bra008307.1
EnsemblPlants:Bra008307.1-P	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0009507
GO:GO:0009536	InterPro:Hydrolase_4	InterPro:IPR029058	UniProt:M4CVR0	PFAM:PF12146	PRINTS:PR00111
PANTHER:PTHR11614	PANTHER:PTHR11614:SF94	SUPFAM:SSF53474	UniParc:UPI000254610D	:	:

Description

AT1G77420 (E=1e-192) | hydrolase, alpha/beta fold family protein

Coordinates

chrA02:+:14609649..14611652

Molecular Weight (calculated)

42885.8 Da

IEP (calculated)

7.498

GRAVY (calculated)

-0.192

Length

382 amino acids

Sequence
(BLAST)

001: MDRALTSRFN IPSTLSPYYQ SRTSLAAITR RFTPAIVSAK RSPIEGVSDE LNLIASEELD QAPARRRVRS AFVDLQLQLD HCLFKKAPIG IRTEEWYERN
101: SKGEEIFCKC WLPEAGVKIK AAVYFCHGYG STCTFLFDGI AKQIAGSRYG VYAIDHPGFG LSDGLHGHIP SFDDLADNAI EQFTKMKGRP ELRNVPRFLF
201: GQSMGGAIAL KVHLKEPQAW DGLILVAPMC KISEDVKPPK LVLNALILMS TLFPKAKLFP KKDMSELFFR DPSKRKLSDY DVICYDDQTR LKTAVELLNA
301: TRDIEMQVDK VSLPLLILHG AADRVTDPNV SKFLHEQAIS EDKTLKLYPG GYHCILEGDT DENIFTVIND IVAWLDARTT PK

Best Arabidopsis Sequence Match ( AT1G77420.1 )
(BLAST)

001: MDRALTPRFD TPATLSPFRY RYGSSLAITR RFAPAIVCAK RSPIDGVSDE LNLIASQNLD QAPARRLARS AFVDLQLQLD HCLFKKAPSG IRTEEWYERN
101: SKGEDIFCKS WLPKSGDEIK AAVCFCHGYG STCTFFFDGI AKQIAGFGYG VYAIDHPGFG LSDGLHGHIP SFDDLADNAI EQFTKMKGRS ELRNLPRFLL
201: GQSMGGAVAL KIHLKEPQAW DGLILVAPMC KISEDVKPPP LVLKTLILMS TLFPKAKLFP KRDLSDFFFR DLSKRKLCEY DVICYDDQTR LKTAVELLNA
301: TRDIEMQVDK VSLPLLILHG DTDKVTDPTV SKFLHKHAVS QDKTLKLYPG GYHCILEGDT DENIFTVIND IVAWLDARVD PK

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FVW6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.